| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0413 |
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| Symbol | |
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| ID | 5170323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 398459 |
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| End bp | 399388 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562912 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001244013 |
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| Protein GI | 148269553 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1087] UDP-glucose 4-epimerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000968529 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTTC TGGTAACAGG CGGAGCGGGC TTCATAGGAT CCCACGTGGT GGACAAACTG
ATAGAAAACG GATACGGCGT CATTGTGGTG GACAATCTAT CCTCTGGAAA GGTCGAAAAC
CTCAACAGAA ACGCGCTGTT TTATGAACAG AGTATAGAGG ACGAAGAAAT GATGGAGCGG
ATCTTCTCTC TGCACAGACC CGAGTATGTC TTTCACCTCG CCGCTCAGGC TAGTGTCGCC
ATCTCCGTTA GGGAACCTGT CAGAGACGCG GAAACGAACA TCATTGGATC TCTTGTGCTT
CTTGAAAAAT CCATCAAGCA CGGTGTTAAA AAATTCATTT TTTCATCCAC CGGTGGGGCT
ATATACGGAG AGAATGTGAA GGTCTTTCCA ACACCAGAGA CGGAGACACC TCATCCGATA
TCACCTTACG GTATTGCGAA GTACAGCATC GAGATGTACC TGGAATTCTT CGCAAGAGAG
TACGGGCTGA AGTACACAGT CCTCAGATAC GCCAACGTTT ACGGGCCAAG ACAGGATCCG
TACGGTGAAG CGGGCGTGGT GGCCATCTTC ACTGAAAGGA TGCTCAGGGG AGAGGAAGTT
CACATATTCG GTGATGGAGA GTACGTCAGA GACTACGTTT ACGTTGATGA CGTAGTCAGA
GCGAATCTTC TCGCCATGGA GAAAGGCGAC AACGAAGTCT TCAACATAGG AACGGGAAGG
GGCACGACCG TGAACCAGCT CTTCAAACTG CTGAAAGAGA TCACTGGCTA CGATAAAGAG
CCCGTCTATA AACCACCGCG TAAGGGCGAC GTGAGAAAGA GCATTCTCGA TTACACGAAG
GCGAAAGAGA AGCTCGGCTG GGAACCAAAA ATTCCTCTTG AGGAGGGATT GAAGCTCACC
GTTGAGTATT TCAGAAAAAC CCTTGAATGA
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| Protein sequence | MNVLVTGGAG FIGSHVVDKL IENGYGVIVV DNLSSGKVEN LNRNALFYEQ SIEDEEMMER
IFSLHRPEYV FHLAAQASVA ISVREPVRDA ETNIIGSLVL LEKSIKHGVK KFIFSSTGGA
IYGENVKVFP TPETETPHPI SPYGIAKYSI EMYLEFFARE YGLKYTVLRY ANVYGPRQDP
YGEAGVVAIF TERMLRGEEV HIFGDGEYVR DYVYVDDVVR ANLLAMEKGD NEVFNIGTGR
GTTVNQLFKL LKEITGYDKE PVYKPPRKGD VRKSILDYTK AKEKLGWEPK IPLEEGLKLT
VEYFRKTLE
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