Gene Tpet_0411 details

Gene Information

• Locus tag: Tpet_0411
• ID: 5171692
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 397361
• End bp: 397942
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640562910
• Product: phage SPO1 DNA polymerase-related protein
• Protein accession: YP_001244011
• Protein GI: 148269551
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1573] Uracil-DNA glycosylase
• TIGRFAM ID: [TIGR00758] uracil-DNA glycosylase, family 4

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000323475
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTATACAA GGGAAGAACT CATGGAGATA GTGTCAGAGA GAGTGAAAAA GTGTACGGCT 
TGCCCACTTC ATCTGAATAG GACAAACGTT GTCGTAGGAG AAGGAAATCT GGATACGAGG 
ATCGTTTTTG TGGGAGAAGG ACCGGGAGAG GAAGAAGACA AGACGGGAAG ACCTTTCGTC 
GGAAGAGCGG GAATGCTTCT GACGGAGCTA CTCAGAGAAT CAGGTATCAG AAGAGAAGAT 
GTTTACATAT GCAACGTTGT GAAATGCAGG CCTCCCAACA ACAGAACACC CACTCCTGAA 
GAACAGGCGG CATGTGGACA TTTTTTACTC GCTCAGATCG AAATCATCAA CCCAGATGTG 
ATAGTTGCTC TCGGAGCCAC GGCATTGTCT TTCCTCATGG ATGGGAAAAA GGTATCCATA 
ACCAAAATCA GAGGAAATCC CATCGACTGG CTCGCAGGAA AAAAGGTCAT TCCAACATTC 
CATCCGAGTT ATCTTCTGAG AAATAGAAGT AATGAACTCA GAAAGATCGT TCTTGAGGAT 
ATTGAGAAAG CAAAAAGTTT CATAAAGAAG GAGGGTCGAT AG 

 

Protein sequence

MYTREELMEI VSERVKKCTA CPLHLNRTNV VVGEGNLDTR IVFVGEGPGE EEDKTGRPFV 
GRAGMLLTEL LRESGIRRED VYICNVVKCR PPNNRTPTPE EQAACGHFLL AQIEIINPDV 
IVALGATALS FLMDGKKVSI TKIRGNPIDW LAGKKVIPTF HPSYLLRNRS NELRKIVLED 
IEKAKSFIKK EGR