| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0410 |
|---|
| Symbol | |
|---|
| ID | 5171322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 396817 |
|---|
| End bp | 397251 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640562909 |
|---|
| Product | flagellar export protein FliJ |
|---|
| Protein accession | YP_001244010 |
|---|
| Protein GI | 148269550 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2882] Flagellar biosynthesis chaperone |
|---|
| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000843578 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTTTTA GATTTAGACT TCAGAGAATA TACGATGTTC GAAGAAAGGA AGAAGAAACT
TTGAAAAACG ATCTCTCAAA AATCAATGAA AAAGTGGAAA ATACCCAGAG AATTATACAA
CAACTTTCCG CTGAAAAGAA GCGAATAGAA AGTAATTTTC TTCACAAAAA GGTTCTCAGA
AAGGAAGATC TCCTGAATAT GGAGATGCAG ATGGTGTTTT TTGAAGAAGA GATCAAAAAA
AAGCAAAGTG AACTTTCTGA ACTGATGAAG GAACAGGAAA AAACGAGAAG TAAACTTTTT
GAAAAAATGA AGGAGAGAAA GATTCTTGAA AAATTAAAAG AAAGAAAGAT GCGAGAGTAC
TTTCGTGAGG AAAACCTCAA AGAAAGGAAG ACCATGGATG AAATAGCGGA GAGGAAGTTC
TGGTGGGAAA GTTAA
|
|---|
| Protein sequence | MPFRFRLQRI YDVRRKEEET LKNDLSKINE KVENTQRIIQ QLSAEKKRIE SNFLHKKVLR
KEDLLNMEMQ MVFFEEEIKK KQSELSELMK EQEKTRSKLF EKMKERKILE KLKERKMREY
FREENLKERK TMDEIAERKF WWES
|
|---|
| |