| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0408 |
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| Symbol | |
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| ID | 5170609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 393585 |
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| End bp | 395318 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562907 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001244008 |
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| Protein GI | 148269548 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0380971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGATGA AAGACCTCTA CGCTCCTACT CTCAAAGAAA CCCCTTCCGA TGTTGAGACA
GTGAGCCACG AGTATCTTCT TCGAGGGGGT TTCATCAGAA AAGTAGCCGC CGGTATATAC
ACCTACCTCC CATTAGGAAG AAGAGTACTT CTCAAAATAG AGAACATAGT CCGAGAAGAG
ATGAACAGGA TAGGGGCACA GGAAATTCTG ATGCCCATCC TTCAACCTGC GGAACTCTGG
AAACAGTCAG GAAGGTGGGA CGATTACGGT CCCGAAATGA TGAAACTCAA AGACAGGCAC
GAAAGAGACT TCACACTCGG TCCCACGCAC GAGGAGATCG TCACGGACCT TGTGAAGAAC
GAGCTCCGTT CGTACAAACA GCTTCCTCTC ACTCTGTATC AGATAGCGAA CAAGTACAGA
GACGAAATCA GACCACGTTT CGGTCTTCTC AGGGCGAGAG AGTTCATCAT GAAGGATGCT
TACAGCTTTC ACGCGAGTTG GGAATCTCTG GACGAGACGT ACGAAGAGTT CAAAAAAGCG
TACTCCCGAA TTATGGAAAG GCTCGGCGTG AGGTACATGA TCATAGAGGC AGAAACGGGT
GCCATCGGAG GGAACGCTTC CCACGAGTTC GTCGTCCCCG CGAAGATAGG AGAGACGAAC
GTGCTTTTCT GTGAAAAGTG CGGTTATCAG GCAAGCGATG AAAAAGCCGA ATACAGGGGT
GAATACACTC AGGAACAGGA AAAAGAAAAA ACTCTCGAGA AGGTCCCTAC ACCCGGGGTG
AAGACGATCG AGGAAGTCTC AAAGTTTCTC GGTGTTTCCC CGTCGAAGAT CGTGAAATCC
CTTCTCTACA AAGGAAGAGA AGGATACGTC ATGGTACTCA TAAGAGGAGA CCTGGAGCTC
AATGAAGCGA AACTCAAAGC ACATTTGAAA GATCAGTCGC TGAGAATGGC AACTCCAGAA
GAAATTCTGA AGGACTTCGG TGTTCCTGTC GGATTCATTG GACCCATCGG TGTGGATGTG
AAGAAAGTGG CCGATCACAG CGTCAGGGGG CTGAAAAACT TCGTCGTTGG GGGTATGGAA
GAGGACACGC ACTACGTAAA CGCAAACCAT CCCAGAGATT TCAAGGTGGA CGAGTGGTAC
GATCTGAGAA CGATGGTGGA GGGCGATCCC TGTCCCGTCT GTGGTGAGCC TCTCAAGGCA
ACAAAAGGCA TAGAACTTGG TCACATATTC AAACTCGGTA CAAAATACTC CGAAGCCATG
AAGGCCTACT TTATGGATGA AAACGGTGAG ATGAAGCCTT TCATCATGGG CTGTTATGGC
TGGGGAGTTT CCAGAACGAT GGCGGCTGTT GTGGAGCATT TCCACGATGA GAACGGTATG
ATCTGGCCCC TTTCGATCGC CCCTTACACC GTTGTGGTGG ACATTCTGAA CATGAACGAC
GCTGAACAGA AGCAGGTGGG AGAAAAGATT TACCAGGTTC TCTCAGAAAA AGGAGAAGAG
GTTGTTCTGG ATGACAGAGA AGTCTCGCCT GGTTTCAAAT TCAAAGACGC CGATCTCATA
GGCTTTCCCA TAAGAATAAA CGTGGGAAGA TCCCTCAAGG AAGGTGTTGT TGAACTGAAG
AAACGCTATT CGAAAGAACT CGTCAAGGTG AACATCAAAA ACGGTTTCGG CACGCTTCTG
GAAACACTGG AAAAGATGAA GCGGGAGTAC GATCCCAAGG AGGCTGCCAG GTGA
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| Protein sequence | MRMKDLYAPT LKETPSDVET VSHEYLLRGG FIRKVAAGIY TYLPLGRRVL LKIENIVREE
MNRIGAQEIL MPILQPAELW KQSGRWDDYG PEMMKLKDRH ERDFTLGPTH EEIVTDLVKN
ELRSYKQLPL TLYQIANKYR DEIRPRFGLL RAREFIMKDA YSFHASWESL DETYEEFKKA
YSRIMERLGV RYMIIEAETG AIGGNASHEF VVPAKIGETN VLFCEKCGYQ ASDEKAEYRG
EYTQEQEKEK TLEKVPTPGV KTIEEVSKFL GVSPSKIVKS LLYKGREGYV MVLIRGDLEL
NEAKLKAHLK DQSLRMATPE EILKDFGVPV GFIGPIGVDV KKVADHSVRG LKNFVVGGME
EDTHYVNANH PRDFKVDEWY DLRTMVEGDP CPVCGEPLKA TKGIELGHIF KLGTKYSEAM
KAYFMDENGE MKPFIMGCYG WGVSRTMAAV VEHFHDENGM IWPLSIAPYT VVVDILNMND
AEQKQVGEKI YQVLSEKGEE VVLDDREVSP GFKFKDADLI GFPIRINVGR SLKEGVVELK
KRYSKELVKV NIKNGFGTLL ETLEKMKREY DPKEAAR
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