| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0401 |
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| Symbol | mnmA |
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| ID | 5170822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 388753 |
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| End bp | 389829 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640562902 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001244003 |
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| Protein GI | 148269543 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00780363 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGTAG GGGTGGCTCT CAGCGGAGGA GTGGACAGTG CGGTAGCTCT CTATCTGTTG
CTGAAAGAAG GGCACGAGGT AAAGGCCTTC CACATGAAGA CGAAGGAAGA TGAATTCTTC
ATCAGAAAAG AGATAAAGAA GAAGGTATGC TGTAGTCCAT CGGATACGGC TGACGCAATG
AGAATAGCAC ACTTTCTCGG AGTGGAGATA GAGATCGTCG ATGTGAAGGA GATCTTCAGA
GAGAAAGTCA TCGAACCGTT CAAGAGTGAT CTTCTCAAAG GTCTCACTCC GAATCCCTGC
GTACACTGTA ATCGCTTCGT GAAATTTGGA TACCTCATGG ATTACGTTCT CAACCAGGGA
TTCGATGCGT TTGCGAGTGG ACACTACGCG AGAATAGAGT TCAGCGAAAA GTACGGGAGA
AAGGTGATAA AAAAGGGTGT GGATCTGAAG AAAGATCAGT CGTATTTCCT TGCCAGGATC
GAGCCCTGGA GAATAGAAAG ACTCATCTTC CCGAACGGCA TCTACACGAA AGAAGAGATC
AGAAAAATCG CAGAAGAAGC GGGAATACAC GTTGCAAAGA AACAGGAAAG TCAGGATGTG
TGCTTCATAC CGGATGGCAG CATCGAAAAC TTTTTGAAAG ACGAAGGTAT AACGCTCAAA
GAGGGTGATC TCATCACACC TGAGGGAGAG GTCGTTGGTC GGCATTTCGG GTATCCTCTC
TACACAATCG GTCAGAGGAA GGGCTTCAAA ATAGAAAAAT TCGGAAGAAG ATACTACGTG
AGGGGCAAGA TTCCGGAGAA GAACGTTGTT GTCGTATCAG ATCTGGAAGA TGTTTTCTTC
TCCGGTTTGA TCGCAGAAGA TCCTGTCTGG CATGTTGAAG TACCGGAAGA GTTCAAATGT
GTCTGCAGAG TGAGGAAAAA ATCGGAAGAG GCTCCCGCAG TTGTCAAGTT AAGAGATAAC
GAAGTGGAGG TCAGGTTCGA GAAGAAAGTC TTCGCCGTCA CACCGGGTCA GATCGCTGCC
TTTTACGATG GAGACACACT CCTCGGAGGA GCGATTATAA AGGAGGGTAT CCGATGA
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| Protein sequence | MKVGVALSGG VDSAVALYLL LKEGHEVKAF HMKTKEDEFF IRKEIKKKVC CSPSDTADAM
RIAHFLGVEI EIVDVKEIFR EKVIEPFKSD LLKGLTPNPC VHCNRFVKFG YLMDYVLNQG
FDAFASGHYA RIEFSEKYGR KVIKKGVDLK KDQSYFLARI EPWRIERLIF PNGIYTKEEI
RKIAEEAGIH VAKKQESQDV CFIPDGSIEN FLKDEGITLK EGDLITPEGE VVGRHFGYPL
YTIGQRKGFK IEKFGRRYYV RGKIPEKNVV VVSDLEDVFF SGLIAEDPVW HVEVPEEFKC
VCRVRKKSEE APAVVKLRDN EVEVRFEKKV FAVTPGQIAA FYDGDTLLGG AIIKEGIR
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