| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0400 |
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| Symbol | |
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| ID | 5171119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 388141 |
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| End bp | 388671 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640562901 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_001244002 |
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| Protein GI | 148269542 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000263629 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTC ACGGAACAAC GATACTGGTT GTGAGAAGAA ACGGGCAAAC GGTGATGGGA
GGAGACGGTC AGGTCACTTT CGGTTCGACC GTTTTGAAGG GAAACGCGAG AAAGGTTAGA
AAGCTTGGGG AAGGAAAAGT ACTCGCTGGT TTTGCGGGAT CTGTGGCGGA CGCTATGACG
CTCTTCGATA GATTCGAAGC GAAACTGAGG GAATGGGGCG GCAACCTCAC AAAGGCCGCC
GTTGAGCTCG CAAAAGATTG GAGAACGGAC AGAGTTCTGA GAAGACTGGA AGCCCTGCTT
CTTGTAGCAG ATAAAGAGAA CATCTTCATC ATATCGGGAA ACGGCGAGGT CATCCAGCCC
GACGACGATG CGGCCGCCAT CGGTTCAGGA GGACCTTACG CACTCGCCGC CGCCAAGGCC
CTTCTCAGAA ACACCGATCT CTCCGCGCGG GAAATCGTGG AGAAAGCGAT GATGATAGCA
GGTGAGATCT GCATCTATAC GAACCAGAAC ATAGTGATCG AAGAAGTTTA G
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| Protein sequence | MKFHGTTILV VRRNGQTVMG GDGQVTFGST VLKGNARKVR KLGEGKVLAG FAGSVADAMT
LFDRFEAKLR EWGGNLTKAA VELAKDWRTD RVLRRLEALL LVADKENIFI ISGNGEVIQP
DDDAAAIGSG GPYALAAAKA LLRNTDLSAR EIVEKAMMIA GEICIYTNQN IVIEEV
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