| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0399 |
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| Symbol | hslU |
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| ID | 5170948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 386738 |
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| End bp | 388129 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562900 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001244001 |
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| Protein GI | 148269541 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00231794 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGTT TCGATGAAAT GACTCCGAAG GAAATCGTTC AAGAACTCGA TAAATACATA
GTTGGTCAGT ACGAAGCGAA AAAGGCCGTG GCGATAGCAG TTCGAAACAG AATCAGAAGA
CAGAAGCTTC CAGAAGAATG GAGAAAAGAA GTGCTTCCCA AGAACATCCT GATGATCGGA
CCCACGGGTG TGGGAAAGAC AGAGATCGCC CGGAGACTGG CTCAGCTTTC CGGATCCCCG
TTCTTGAAAG TCGAAGCGAC GAGGTTTACG GAAGTGGGAT ACGTGGGAAA GAACGTGGAC
TCGATGATAA GGGATCTGGT TGAAATCAGT GTCAACATGG TGAAGCAGGA AAAGATAAAA
GAAGTGGAAA GACAGGCAGA AGAACTGGTT GAAGAGCGAA TTCTCGATGC TCTCGTGCCC
GAATCGAAAG CCGTGCCGGT TGTCACGAAT CCCTTCATAA ACCTCATAAC CGGTGGACAG
CAACAGCAGT ACACGCCGGA AGACAGGAGA AGGTTCAGAG CGAAAAGGGA AGAAATGAGG
GAGAAACTGA GAAAGGGAGA GCTGGAAAAC GAAGAGATCG AAATAGAACT CGAAGAAACG
GTTTCTCCGT TCATGGGAAT CTTTGGACCG GGTATGGAAG ACCTCGGGAT AGAGATCACG
AATATGTTCA GTGGGATGCT TCCAAAGCAG AAGAAAAAGA GAAAGATGAA AGTCTCTGAA
GCGAGGAAGG TTCTGCTGCC TTTGGAAGCG GAAAAACTCA TAGACATGGA CAAGGTGGTT
CAGGAAGCAC TCGACAGAGC TCAGAACAGG GGAATCATCT TCATAGATGA AATAGACAAG
ATCGCCGGGA AAGAGAGTGC GGTGGGACCA GATGTCTCCA GACAAGGTGT CCAGAGAGAC
CTTCTCCCCA TCGTCGAAGG TACCACGATC ATGACCAAGT ACGGACCGGT GAGAACGGAT
TACATTCTCT TCATAGCGGC TGGAGCATTT CACGTTTCGC GACCATCGGA TCTCATCCCG
GAGCTTCAGG GACGTTTCCC GATACGTGTG GAACTGTCAC CTCTCACCGA GGAGGATTTC
GTGAGGATAC TGAAAGAACC AGAGAACGCC ATCATAAAAC AGTACCAGGC ACTTCTTTCA
ACGGAAGGCG TGGAACTCGT CTTCACCGAG GATGGAATCA GAGAAATGGC TCGAATAGCG
TATCAGCTGA ATCAAAGACT CGAAAACATC GGAGCCAGAA GGCTATACAC GGTCGCTGAA
AAGGTCCTTG AGGAGATCTC TTTCGAAGCA CCGGATATTC CGGAAAAGAG GGTCGTTGTG
GATGCCGAAT ACGTGAGAAG AAGACTCGAA AAGATCGTTC AGGACGAGGA TCTGAGCGCG
TACATACTGT GA
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| Protein sequence | MKSFDEMTPK EIVQELDKYI VGQYEAKKAV AIAVRNRIRR QKLPEEWRKE VLPKNILMIG
PTGVGKTEIA RRLAQLSGSP FLKVEATRFT EVGYVGKNVD SMIRDLVEIS VNMVKQEKIK
EVERQAEELV EERILDALVP ESKAVPVVTN PFINLITGGQ QQQYTPEDRR RFRAKREEMR
EKLRKGELEN EEIEIELEET VSPFMGIFGP GMEDLGIEIT NMFSGMLPKQ KKKRKMKVSE
ARKVLLPLEA EKLIDMDKVV QEALDRAQNR GIIFIDEIDK IAGKESAVGP DVSRQGVQRD
LLPIVEGTTI MTKYGPVRTD YILFIAAGAF HVSRPSDLIP ELQGRFPIRV ELSPLTEEDF
VRILKEPENA IIKQYQALLS TEGVELVFTE DGIREMARIA YQLNQRLENI GARRLYTVAE
KVLEEISFEA PDIPEKRVVV DAEYVRRRLE KIVQDEDLSA YIL
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