Gene Tpet_0397 details

Gene Information

• Locus tag: Tpet_0397
• ID: 5171175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 385124
• End bp: 385888
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640562898
• Product: hypothetical protein
• Protein accession: YP_001243999
• Protein GI: 148269539

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000447185
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAACT TCGTGGTCAC AACCTCACAC AAACCGGACA GGGAGCAGGT AATGAAAGCG 
AAGGAGCTCG CTGAAAAGCT CGGCACCATC TACGTTTCAA GAAGGAGATT GAAAGAGTTC 
AAAGTGGACT TTTACTACGT GGTGGAGAAG AACAGAATCT CAATAAAATG GCCCGGAGGA 
GAGTTCTTTT TTCATCCTTC TTCGGCTATC CTCCGGATGA GGAACATAAG AAGCGGTCAG 
AAGGACTACC TGATAGAATC CCTTCAACCG GAGGGAAACG AAATCGTGCT GGATACGACC 
TTTGGTCTTG GAAGCGAAGC CATCCTCATG GCCGCTTTTC TTCCTGAGGG TAAGGTAATC 
GGTCTTGAAG GATCCATTCA CATATACACC ATCGTGAAAT ACGGAATGGA AAATTTTGAG 
ACTGACATTC AGTGGTTGAA AGACGCTTTA AAAAGAATAG AGCTTTATCA CGCGAATTTC 
AAAGAATACA TCAGAAGTCA GCCCGACAAT TCTTTCGATG TGGTCTACTG TGATCCCATG 
TTTGAGAATC CCGTGTACGA GTCCTCTGCC ATGAATCCTC TGAGGCCCTT CGCTGTGTAC 
GACACGGTGA ACGAAGAAGA CATTGAGGAA ATGCTGAGAA TCGCGAAGAA GAAGGTGATC 
CTCAAAAGCC ACGTGAAGGA TTCTCTCTTC AAAAGAATCA GGGTTGACGA ACTGAAAGGT 
TCCAGAAAGA GCGGTGTTCT CTACGGGGTG ATATACAAGC GATGA 

 

Protein sequence

MKNFVVTTSH KPDREQVMKA KELAEKLGTI YVSRRRLKEF KVDFYYVVEK NRISIKWPGG 
EFFFHPSSAI LRMRNIRSGQ KDYLIESLQP EGNEIVLDTT FGLGSEAILM AAFLPEGKVI 
GLEGSIHIYT IVKYGMENFE TDIQWLKDAL KRIELYHANF KEYIRSQPDN SFDVVYCDPM 
FENPVYESSA MNPLRPFAVY DTVNEEDIEE MLRIAKKKVI LKSHVKDSLF KRIRVDELKG 
SRKSGVLYGV IYKR