Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0397 |
Symbol | |
ID | 5171175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 385124 |
End bp | 385888 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640562898 |
Product | hypothetical protein |
Protein accession | YP_001243999 |
Protein GI | 148269539 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000447185 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT TCGTGGTCAC AACCTCACAC AAACCGGACA GGGAGCAGGT AATGAAAGCG AAGGAGCTCG CTGAAAAGCT CGGCACCATC TACGTTTCAA GAAGGAGATT GAAAGAGTTC AAAGTGGACT TTTACTACGT GGTGGAGAAG AACAGAATCT CAATAAAATG GCCCGGAGGA GAGTTCTTTT TTCATCCTTC TTCGGCTATC CTCCGGATGA GGAACATAAG AAGCGGTCAG AAGGACTACC TGATAGAATC CCTTCAACCG GAGGGAAACG AAATCGTGCT GGATACGACC TTTGGTCTTG GAAGCGAAGC CATCCTCATG GCCGCTTTTC TTCCTGAGGG TAAGGTAATC GGTCTTGAAG GATCCATTCA CATATACACC ATCGTGAAAT ACGGAATGGA AAATTTTGAG ACTGACATTC AGTGGTTGAA AGACGCTTTA AAAAGAATAG AGCTTTATCA CGCGAATTTC AAAGAATACA TCAGAAGTCA GCCCGACAAT TCTTTCGATG TGGTCTACTG TGATCCCATG TTTGAGAATC CCGTGTACGA GTCCTCTGCC ATGAATCCTC TGAGGCCCTT CGCTGTGTAC GACACGGTGA ACGAAGAAGA CATTGAGGAA ATGCTGAGAA TCGCGAAGAA GAAGGTGATC CTCAAAAGCC ACGTGAAGGA TTCTCTCTTC AAAAGAATCA GGGTTGACGA ACTGAAAGGT TCCAGAAAGA GCGGTGTTCT CTACGGGGTG ATATACAAGC GATGA
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Protein sequence | MKNFVVTTSH KPDREQVMKA KELAEKLGTI YVSRRRLKEF KVDFYYVVEK NRISIKWPGG EFFFHPSSAI LRMRNIRSGQ KDYLIESLQP EGNEIVLDTT FGLGSEAILM AAFLPEGKVI GLEGSIHIYT IVKYGMENFE TDIQWLKDAL KRIELYHANF KEYIRSQPDN SFDVVYCDPM FENPVYESSA MNPLRPFAVY DTVNEEDIEE MLRIAKKKVI LKSHVKDSLF KRIRVDELKG SRKSGVLYGV IYKR
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