| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0396 |
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| Symbol | miaA |
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| ID | 5171359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 384210 |
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| End bp | 385127 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640562897 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001243998 |
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| Protein GI | 148269538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000512804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATAG CCATAGTCGG TGGGCCCACT GCTGTTGGAA AGACAGATAT CATGATCGAA
GTCTGTGAAG AGATAGGTGC GGAGATCATC TCGATGGACT CGAGGCAGAT CTATCGCTAT
ATGGACATAG GAACAGCCAA GCCAACATCG GAGCAGAGAA GAAGGGTTCC TCATCACATG
ATAGATATCA TCGATCCCGA TGAATATTAC AACGCTTTCA TGTACAGGAA GGATTCTCTG
AGAGCAATGG AAGACGTTCT CAGACGTGGG AAGATTCCTG TTTACGTTGG AGGAACGGGG
CTGTACGCGG ATGCGCTGGT TCGGGGTATA TTCGAAGGAG TGCCTGCCGA TGAAAACATA
AGAAAAGAAC TCAGAGAACT AGAGAGAAGA GAACCCGGGA TTTTGAGAAA AATGCTCGAA
GAGTTCGATC CTGAAGCGGC GACGCGCATT CATCCAAACG ATCTCAAGAG GACGATCAGA
GCCCTTGAAG TTTACATGAA AACGGGAAGA AGGATCTCGG AACTTCAAAA AGAAGCAAAG
GGTGACGACA GGTTTTTCAT AATTGTTTTG ACTCGGGAAA GGTACGAACT TTACGAGAGA
ATAAACAAAA GAGTTGATAA GATGATAGAG ATGGGCCTAG TAGATGAGGT GAAGAGACTC
TTGGGGATGG GATATTCGAA AGATCTCAAT TCGATGAAAA CGATAGGATA CAGAGAAGTC
ATTGACTATC TGGAAGGGAA GTACGATTTT GACAAGATGG TTCATCTCAT AAAACGAAAC
ACCAGACACT TTGCCAGAAG ACAAATCATA TGGTTCAAAA GATACAAAGA AGCTGTGTGG
TACAATTTAA CGTTCGAAGA TGTAGGAGAA GTAAAGGAGA AACTCAAGAA GCTGATAGTT
GAAAATTTTT CAGTATAA
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| Protein sequence | MKIAIVGGPT AVGKTDIMIE VCEEIGAEII SMDSRQIYRY MDIGTAKPTS EQRRRVPHHM
IDIIDPDEYY NAFMYRKDSL RAMEDVLRRG KIPVYVGGTG LYADALVRGI FEGVPADENI
RKELRELERR EPGILRKMLE EFDPEAATRI HPNDLKRTIR ALEVYMKTGR RISELQKEAK
GDDRFFIIVL TRERYELYER INKRVDKMIE MGLVDEVKRL LGMGYSKDLN SMKTIGYREV
IDYLEGKYDF DKMVHLIKRN TRHFARRQII WFKRYKEAVW YNLTFEDVGE VKEKLKKLIV
ENFSV
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