Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0391 |
Symbol | |
ID | 5170754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 380334 |
End bp | 381503 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640562892 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001243993 |
Protein GI | 148269533 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGTA TCGAAGTGCT GAGTCTGAGA AAGTATTTCC CGATCAGAAA AGGATTTCTT GTGAAAAAGA TCGTTGGTTA CGTGAAAGCG GTCGATGATA TCTCTTTTTC CGTGGAAAAG GGAAAAACGT TCGCCCTCGT TGGCGAGTCG GGATGTGGGA AGACAACGAC CGCAAAGACG ATCCTGCGCC TCACGAATCC CACCGCGGGC CGTGTTGTGA TCGACGGTGA CGACACAACA TACTACTTCA TGAAGAGAAA AGATGCGGAG AACTACCTGA AAACGACCTA CGTGGGTATA TTCCGCGAAA TGAGGGAAAA ACTCTCACCG GATCAGATTG TGGACGTGCT CGAGGATGTG GATAAGAAGT ACGCGGAGAT CTTCTTTAAA GAAGCGAAAG AAAGCGAAGA GAAGTTCTAT AATATCCTGC TTGATAACAT CGATGAAAAG AGGATGAAAT TCAGAAGGAA GATACAGATC GTCTTTCAGG ATCCCATGAG TTCCTTGAAC CCGAGAATGA CGGTTGGCGA CATCCTCACT GAGCCCATTC TGTTCCACGG ACTGGCGAAA ACACGAGAAG AAGCCGTAGA TATGGCAAAA GATCTTCTCA AAAGCGTGGG GCTCAAGGAA TATCACCTCG AAAGATATCC CCATCAGTTC AGTGGAGGCC AGAGACAGAG GATCGCTATC GCAAGGGCGA TCTCCATAAA CCCCGAGATA GTGATACTCG ACGAACCCAC GGCTTCACTG GACGTTTCCG TTCAGGCACA GGTTATAAAC CTGTTTCTCA AACTGCAGGA AGAGAAAGGT TTTACGTATC TCTTCATCTC GCACGACCTT GGACTTGTGA GATTTATAAG CCACGAGGTC GGCATCATGT ACCTCGGCAG GATCGTGGAG ATGGGAAACA CCGATGAGAT ATTCGACAAT CCCCTTCATC CGTACACCCA AGCCCTGCTT TCTGCTGTTC CCGTGCCGGA TCCGAAGGTT GAGCGCACAA GAAAGCGTAT CATTCTCAGG GGTGGGGTTC CAAGCCCGAT CAACAGGCCG ACTGGCTGCT TCTTCCATCC GAGGTGTCCT TACAAGATGC CCGTGTGTGA GAAAGAGTAT CCGGTGATGA AGGAAATTTC CCCAGGTCAC TGGGTGGCGT GTCATTTACA TTCGTCATAG
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Protein sequence | MKSIEVLSLR KYFPIRKGFL VKKIVGYVKA VDDISFSVEK GKTFALVGES GCGKTTTAKT ILRLTNPTAG RVVIDGDDTT YYFMKRKDAE NYLKTTYVGI FREMREKLSP DQIVDVLEDV DKKYAEIFFK EAKESEEKFY NILLDNIDEK RMKFRRKIQI VFQDPMSSLN PRMTVGDILT EPILFHGLAK TREEAVDMAK DLLKSVGLKE YHLERYPHQF SGGQRQRIAI ARAISINPEI VILDEPTASL DVSVQAQVIN LFLKLQEEKG FTYLFISHDL GLVRFISHEV GIMYLGRIVE MGNTDEIFDN PLHPYTQALL SAVPVPDPKV ERTRKRIILR GGVPSPINRP TGCFFHPRCP YKMPVCEKEY PVMKEISPGH WVACHLHSS
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