| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0382 |
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| Symbol | |
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| ID | 5170071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 369610 |
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| End bp | 370878 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640562883 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001243984 |
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| Protein GI | 148269524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.468203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATTG TTGTGAATTT GAAACCTGAG GAAATCCCAA AGCACTGGTA CAACGTACTC
GCAGATCTTC CGTTCAAACT CGATCCGCCG CTGGACCCCG AAACGAAACA ACCCATTTCA
CCCGAGAAGC TCTCTGTTAT CTTCCCCATG AGTTTGATCG AACAGGAGGT CTCAGAAGAG
CGTTTCATCG AAATACCCGA GCCCGTTCTG AAAGAATACG CCGTTTACAG ACCCACTCCC
CTCATCAGAG CCACTTTCTT AGAAGAGTAC CTCCAGACTC CGGCGAGGAT CTACTACAAG
TACGAAGGAG TGAGCCCCAC TGGAAGCCAC AAGCCGAACA CAGCCATCGC CCAGGCCTAC
TACAACAAGA TAGAAGGGGT CAAAAGGCTC GTCACAGAAA CGGGGGCGGG ACAATGGGGT
AGCGCTCTCT CATATGCCGG CGCCAAGTTC GGATTGGAAG TAAAAGTGTT CATGGTGAAG
ATCAGCTACC AGCAAAAACC GATGAGAAAA TACATGATGA ACCTCTTCGG AGGAAAGGTA
ACTCCAAGCC CCAGTGAAGA AACGAACTTC GGAAAGAAGA TCCTGAGTGA AGATCCAGAC
AATCCAGGTA GTCTTGGCAT CGCCATCAGT GAAGCACTGG AAGTGGCCGT GTCTGATCCG
AACACGAAGT ACTCCCTCGG AAGCGTATTG AACCATGTTC TGCTCCACCA GACGGTTATA
GGCCTCGAAA TCAAGAAACA GCTCGAACTC ATAGGTGAAA AACCAGACAT CTTACTGGGA
TGTCACGGAG GAGGATCGAA TTTTGGAGGA ACGATACTTC CCTTCGTTCC AGACAAACTT
TCCGGAAGGG ATATCAGGTT CGTCGCCTGC GAGCCCGCCG CGTGTCCATC CTTGACGAAA
GGGAATTACG ATTACGATTT CGGAGACACC GCGGGACTCA CACCTCTGCT GAAAATGTAC
ACCCTTGGAA AGGACTTCAT TCCTCCGAAG ATACACGCGG GAGGTCTCAG ATACCACGGC
TCCGCTCCGA TAATCGCAAG ACTCGTGAAA GAAGGACTTG TGGAGGCACA GGCTTTCGAT
CAGGACGAGA CGTTTGAGGC AGCGAAGATC TTCGCAAAGC TCGAAGGAAT AATTCCCGCC
CCGGAATCCG CTCACGCCAT CGCAGGAGCC ATAAGGGAAG CAAAGAAAGC GAAAGAAGAA
GGAAAAGAAC GTGTGATAGT ATTCACTCTG AGCGGCCACG GTCTGCTCGA TCTCACAGCG
TACGTGTGA
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| Protein sequence | MRIVVNLKPE EIPKHWYNVL ADLPFKLDPP LDPETKQPIS PEKLSVIFPM SLIEQEVSEE
RFIEIPEPVL KEYAVYRPTP LIRATFLEEY LQTPARIYYK YEGVSPTGSH KPNTAIAQAY
YNKIEGVKRL VTETGAGQWG SALSYAGAKF GLEVKVFMVK ISYQQKPMRK YMMNLFGGKV
TPSPSEETNF GKKILSEDPD NPGSLGIAIS EALEVAVSDP NTKYSLGSVL NHVLLHQTVI
GLEIKKQLEL IGEKPDILLG CHGGGSNFGG TILPFVPDKL SGRDIRFVAC EPAACPSLTK
GNYDYDFGDT AGLTPLLKMY TLGKDFIPPK IHAGGLRYHG SAPIIARLVK EGLVEAQAFD
QDETFEAAKI FAKLEGIIPA PESAHAIAGA IREAKKAKEE GKERVIVFTL SGHGLLDLTA
YV
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