| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0375 |
|---|
| Symbol | |
|---|
| ID | 5170745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 364323 |
|---|
| End bp | 365168 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640562878 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001243979 |
|---|
| Protein GI | 148269519 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCC TGGTACCGGC CACAACGACC AATCTCGGAG CGGGATTCGA CGTCTTTGGA
CTCGCGCTGG ATCTTTTCAA CGAAGTGGAG TTTTCTTTCG ATACAAAAGA GACAACCATA
GAAAGTACTG GAAAATACGC TTCGGATTTG AAGGACCACA ATCTGTTTTT CGAAGTCTTC
AGGTTCTTTG AGAGAAAAAC CGGGTACAGA GTTCCGCCAG TCAGGATCAA GCAGACATGC
AACATCCCTG TATCGAGCGG TCTTGGATCG AGCGCCGCTG TGATCGTCGC GGCACTCCAC
ATTGCGAACG AAGGAACGGG CAGAAATCTT TCACGGGAAG ATCTTATGAA ACTCGCTGTG
GAGCTGGAAG GACACCCTGA CAACGTTGTA CCCGCTTTCA CAGGGGGGCT TGTGGTCTGT
TATCAAAACG GAAGTCATCT TGATTTTGAA AAGTTCGAGA TCGATCTTTC TCTCACATTT
TTCGTTCCAA ACTTTTCGAT GTGCACGAAC GAGATGAGAA AGATCCTTCC GGAGAAGGTC
CCTTTCGAAG ATGCGGTCTT CAACATAAAG AATTCATGCC AGTTCCTTGC AAAGATCGCA
GCTGGAAAGA TCAAAGAGGC TCTGAAATAC GTGGGAGATC GACTTCACCA GAACTACAGG
ATAAACGGCA ATAAGAAGAT GAAAGAGTTT GTGGAAGCCA TCTTATCAAA AAATCCCGAG
TACTGGTTTG TGAGCGGATC CGGTCCTTCT GTTTGTTCCA ATATAAATGA CTTTGAAGGG
ATTCCCTATC TCAAGGACGT TCTGAAGCTG AGGGTGAACA ACAGGGGGAT GATAGTTTCA
GAATAG
|
|---|
| Protein sequence | MKVLVPATTT NLGAGFDVFG LALDLFNEVE FSFDTKETTI ESTGKYASDL KDHNLFFEVF
RFFERKTGYR VPPVRIKQTC NIPVSSGLGS SAAVIVAALH IANEGTGRNL SREDLMKLAV
ELEGHPDNVV PAFTGGLVVC YQNGSHLDFE KFEIDLSLTF FVPNFSMCTN EMRKILPEKV
PFEDAVFNIK NSCQFLAKIA AGKIKEALKY VGDRLHQNYR INGNKKMKEF VEAILSKNPE
YWFVSGSGPS VCSNINDFEG IPYLKDVLKL RVNNRGMIVS E
|
|---|
| |