| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0374 |
|---|
| Symbol | |
|---|
| ID | 5170998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 363280 |
|---|
| End bp | 364326 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640562877 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001243978 |
|---|
| Protein GI | 148269518 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGG GAATACTCGA AAAGTACAGA GAATTTCTTC CCGTAACAGA CAAAACCCCC
ATGCTCTCTT TGAATGAAGG GAACACTCCT CTCATACCCC TCGTGAACAT GAGCAGGGAA
CTCGGAATAA ACATCTACGT AAAATACGAA GGGGCCAATC CGACGGGGTC CTTCAAAGAC
AGAGGAATGG TCGTTGCCGT CGCAAAGGCA CTGGAAGAAG GCTCGAAAGC CATCATGTGC
GCTTCAACGG GGAACACCTC CGCATCCGCT GCCGCGTACG CCGCAAGGGC AGGAATAAAG
GCGATCGTTC TGATACCAGA AGGGAAGATC GCACTCGGAA AGCTGGCTCA GGCGATGATA
TACGGCGCCG TGGTGCTTCA GGTGAGAGGG AATTTCGACA AGTGTCTGGA ACTGGTCAAG
GAGATCACAT CCAAATATCC CATCACACTC GTGAACAGTA TCAATCCCTA CAGACTCGAA
GGTCAGAAAA CGGCCGCTTT TGAGATAGTC GACGAGCTCG GAGATGCACC GGACTACCAC
TTCATCCCCG TGGGAAACGC GGGCAACATC TCCGCTTACT GGATGGGATA CAAGGAGTAT
TATCAGCATG GGTTCTCCAC CAAACTGCCG AAGATGATGG GATTCCAGGC GGAAGGGGCC
GCCCCCATAG TTCGCGGTCA TCCCATAGAA AACCCGGAGA CGGTCGCCAC TGCAATAAGG
ATCGGTAACC CCGCGAACTG GGAAAAAGCG GTCCGGGCAC GCGATGAATC GGGTGGAGAC
ATCGACATGG TGAGCGACGA AGAAATACTG CGCGCACAGA GACTCTTGGC TCAGAAAGAA
GGGATCTTCT GTGAGCCCGC ATCCGCTGCA TCGATAGCGG GGCTTTTGAA GAAGCACAGA
CAGGGAATCT TCAGGGGTGG AGAGATCGTT GTGTGTACCC TCACAGGGAA CGGTTTGAAA
GATCCGAACA TCGTCATCTC ACAGCTTGAA CCCCCAAGGA TCATAGAAGG AAGAGTAGAA
GAGATTCTGG AGGTACTCGA CATATGA
|
|---|
| Protein sequence | MKLGILEKYR EFLPVTDKTP MLSLNEGNTP LIPLVNMSRE LGINIYVKYE GANPTGSFKD
RGMVVAVAKA LEEGSKAIMC ASTGNTSASA AAYAARAGIK AIVLIPEGKI ALGKLAQAMI
YGAVVLQVRG NFDKCLELVK EITSKYPITL VNSINPYRLE GQKTAAFEIV DELGDAPDYH
FIPVGNAGNI SAYWMGYKEY YQHGFSTKLP KMMGFQAEGA APIVRGHPIE NPETVATAIR
IGNPANWEKA VRARDESGGD IDMVSDEEIL RAQRLLAQKE GIFCEPASAA SIAGLLKKHR
QGIFRGGEIV VCTLTGNGLK DPNIVISQLE PPRIIEGRVE EILEVLDI
|
|---|
| |