| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0370 |
|---|
| Symbol | |
|---|
| ID | 5171372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 357622 |
|---|
| End bp | 358632 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640562873 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001243974 |
|---|
| Protein GI | 148269514 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTGA TTTATTATGA CAAAGACGCG GATCTCGAAC TGATCAGGGA CAAAAAGATC
GCGATCATAG GGTACGGAAG TCAGGGGCAT GCGCACGCGT TGAATCTGAA AGACAGCGGT
CTCAACGTTG TGGTCGGATT GAGAGAGGGA AGCAAGAGCT GGAAGAAGGC GGAGGAACAG
GGTCTCACCG TGAAAGCAAT AGAAGAAGCG GCAAAAGAGG CCGACATCAT CATGATGCTC
ATCCCAGATG AGAACCAGCC GGAGATCTAC AAAAAATACA TAGAAAAACA CCTCACCGAG
GGTAAGATGC TGATGTTCGC CCACGGGTTC AACATCCACT ATCACCAGAT CATACCTCCG
AAGAACGTGG ATGTGACGAT GATCGCTCCG AAGAGCCCTG GTCACATCGT GAGAAGAGAA
TACGTCGAAG GAAGGGGTGT GCCGGCTCTC GTAGCGGTCT ATCAGGACTA CACCGGTAAA
GCCAAAGATA TAGCGCTCGC TTATGCCAAA GGTATCGGTG TGACAAGGGC GGGTGTGATA
GAGACGACCT TCAAGGAAGA GACGGAAACG GATTTGTTTG GAGAGCAGGC GGTCCTCTGT
GGTGGAGTAA CGGCTCTCAT AAAAGCTGGT TTCGAAACTC TTGTGGAGGC GGGTTATCAA
CCGGAAATAG CTTACTTTGA GTGTCTCAAT GAGCTCAAGC TCATCGTTGA CCTCATCTAC
GAGGGTGGTC TCTCTTTCAT GAGATACTCC GTCAGCAACA CCGCGGAGTA CGGTGACTAC
ATCAGTCAGG AAAAGATCGT TACAAAAGAA GTGAGGGAGA ACATGAAGCA GATGCTCAAG
GACATTCAGA CGGGAAAGTT CGCCAAGGAC TGGATACTCG AAAATCAGGC GGGAAGACCC
TACTTCTACA CCATGAGAAA GAAAGAATCA GAGCATCTCA TAGAAAAAGT AGGAAAAGAA
CTCAGAAAAA TGATGCCTTG GCTCAAGGAG AGGAACGTGG ATGAGGAGTG A
|
|---|
| Protein sequence | MAVIYYDKDA DLELIRDKKI AIIGYGSQGH AHALNLKDSG LNVVVGLREG SKSWKKAEEQ
GLTVKAIEEA AKEADIIMML IPDENQPEIY KKYIEKHLTE GKMLMFAHGF NIHYHQIIPP
KNVDVTMIAP KSPGHIVRRE YVEGRGVPAL VAVYQDYTGK AKDIALAYAK GIGVTRAGVI
ETTFKEETET DLFGEQAVLC GGVTALIKAG FETLVEAGYQ PEIAYFECLN ELKLIVDLIY
EGGLSFMRYS VSNTAEYGDY ISQEKIVTKE VRENMKQMLK DIQTGKFAKD WILENQAGRP
YFYTMRKKES EHLIEKVGKE LRKMMPWLKE RNVDEE
|
|---|
| |