Gene Tpet_0365 details

Gene Information

• Locus tag: Tpet_0365
• Symbol: leuD
• ID: 5171481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 351051
• End bp: 351551
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640562868
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_001243969
• Protein GI: 148269509
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02084] 3-isopropylmalate dehydratase, small subunit; [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGTGA AGATAAAGGG AAAGGTTTTC GTTTTTGGGG ACAACGTGAA CACGGACGAG 
ATCATACCGG CTAGGTACCT CAACACTTCT GACCCTCAGG AACTCGCAAA ATACTGTATG 
GAGGACGCGA GACCCGGCTT TGGAAGACGA GACGATATAA AAGGATCGAT CATCGTGGCA 
GGAGAGAACT TCGGATGCGG TTCCTCGAGG GAACACGCTC CCGTTGCCAT AAAGGCGGCT 
GGAATCTCCT GTGTCATAGC CAAGTCTTTT GCAAGGATTT TCTTCAGGAA CGCTATAAAC 
ATCGGTCTCC CCATCGTCGA ACTGAAAGAA GCCGACGAAT TCGAAGAGGG TGACGTAGCA 
GAGGTGGATC TGGAAAACGG AGTGGTGAGG AATCTCACGA AAGGGAAAGA GTACAGAATA 
AGACCATATC CTGAGTTTCT CATGAAGATC ATGGAAGCGG GTGGATGGCT TGAATACTGT 
CTCAAAGAAG TGGGGGAGTG A 

 

Protein sequence

MVVKIKGKVF VFGDNVNTDE IIPARYLNTS DPQELAKYCM EDARPGFGRR DDIKGSIIVA 
GENFGCGSSR EHAPVAIKAA GISCVIAKSF ARIFFRNAIN IGLPIVELKE ADEFEEGDVA 
EVDLENGVVR NLTKGKEYRI RPYPEFLMKI MEAGGWLEYC LKEVGE