| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0350 |
|---|
| Symbol | |
|---|
| ID | 5171456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 334833 |
|---|
| End bp | 336473 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640562854 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001243955 |
|---|
| Protein GI | 148269495 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3584] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000961485 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCTC TGATACTGAT ATTTCTCGCA GCATGCGTAT CTCCCGAACT GGAGGAAAAA
TTGAACAATT TAGAAAACCA GATAAGACAG CTGAACACTC AGATAGACTC CATCGAAAAG
AAGATGCTGG ACTTGGAAAA CAAGATGAAG GCACAGGAAA GTTCTCAGGA AGAGTTGGAA
GCGCTGAAAA GAGATGTAAG ATATCTCAAA GAGGATCTAT CTTCCCTGCA GGAAGAGTTC
TCCAGCAAAA TGAGCGATCT CGAGAACAGT TACTACTCCA TCTCCATGAA ACTTCCTGCA
GTGGAAAAAG CCGCCTCCAT CTTCTCCGAG ATAGAAGACA TGAAATCGAA AATCTCAGAA
TTGGAGAGAA AAGTGAGTAT TGTTTCACTC GGAAGTTCCC CGGAAGTCTC AGAAGATCTG
AAACACATCC TTCTCGATCT CGAAGAGAGG GTTTCCACTC TGGAAAAGAA CGTTTCGGTG
GTGGATCGAA TAGAAGAAAG GCTGGAAAGT ACTGAAAAAC TTCTCTCCAA AGTGGCCTTA
CGCGTTCTTT CACAGGGCGA AACGGAAGCG AAGGTGGTGA ACGTTTCAAA CGATGAGCTG
GAAAGCAGGA TATCTGATAT CGAGAAAAAG CTTTCCTATC TCGAAACCAA CCAGAAGGCG
CTGGAACAGA TCGTTCAAAA TCTGAAAGAT CAGAAGCCTT CCAGCTACGC GAACATAGAT
GTTGAGAGTT ACTCACAGCA GTTGAAAAAA TACCTCGACG AGTTCAGAAG ACTCGTGAGG
AGTTATGAGA TCGCAAGGAT CCTTGGAATA GAGGAAGGAT ACGTGTTTGT AAGAGTGGAG
CGGGGCGACA CCCTCGCGAA GATCAGCAAC GCGTTCAACC TTGGACCCGA CGGTGTGGAA
AAAATCATGA AGCTGAACGG CATAGACGAC CCGAGGAAGC TCATAGCAGG GAGAATCATA
AAGGTTCCCG TCACGAATCT TTCGACAAGT TTTCCAGTTG GAGAAAAACC CGATCCAAAG
GTGATCGTCT CCGGCTTTGG CCTGAAAACC GATGGAACTT TTTCCACGGG GGTTGAGGTG
GAAAGCAACG GGCAGAAGGT AAAAGCTGCG CTTCCAGGGC GAGTGAAGAG TGTAAGCAAC
GGAACCGTTG TCATATATCA CGGAAACGAT GTGGAAACGG TGTACAGAAA TCTCGCTGTG
GTTTCGGTGA ACGCTGGTGA CTGGGTGAGT GCGGGTGACA CCATAGGATA CGGTGGAAAG
AACGTTGTCT TCGAACTGTA TGTGGAAGGA GAACCTAAGG ACCCCATGCT CCTTTTCTTT
TCCAATATGG GAGAGTTCGA AATCAGTTTC TACACGGAGT GGGAAGATGG AAAATTACCG
GAACACCCCG CCTTCAGACT CACAAAATCC GGCAAAATTC CTGAAGATTG GAAAACAGCG
GCCGCGGATA CCACCATCTT CCCCCTGGGT TCTGTTCTCT ACATACCAGA GCTCAGAGAC
ACGCCCAGTG GTGGGGTTTT CGTTGTGGAA GACATCGGCG GGGTGATCAA AGGAAGAAAG
ATCGATATAT ATCTGAACAG CATAAGAGAG GCGCTCCAAA ACAGAAAGAT CGTGTCCAGA
GTCTTCGTGT GGAGGGATTG A
|
|---|
| Protein sequence | MFSLILIFLA ACVSPELEEK LNNLENQIRQ LNTQIDSIEK KMLDLENKMK AQESSQEELE
ALKRDVRYLK EDLSSLQEEF SSKMSDLENS YYSISMKLPA VEKAASIFSE IEDMKSKISE
LERKVSIVSL GSSPEVSEDL KHILLDLEER VSTLEKNVSV VDRIEERLES TEKLLSKVAL
RVLSQGETEA KVVNVSNDEL ESRISDIEKK LSYLETNQKA LEQIVQNLKD QKPSSYANID
VESYSQQLKK YLDEFRRLVR SYEIARILGI EEGYVFVRVE RGDTLAKISN AFNLGPDGVE
KIMKLNGIDD PRKLIAGRII KVPVTNLSTS FPVGEKPDPK VIVSGFGLKT DGTFSTGVEV
ESNGQKVKAA LPGRVKSVSN GTVVIYHGND VETVYRNLAV VSVNAGDWVS AGDTIGYGGK
NVVFELYVEG EPKDPMLLFF SNMGEFEISF YTEWEDGKLP EHPAFRLTKS GKIPEDWKTA
AADTTIFPLG SVLYIPELRD TPSGGVFVVE DIGGVIKGRK IDIYLNSIRE ALQNRKIVSR
VFVWRD
|
|---|
| |