Gene Tpet_0349 details

Gene Information

• Locus tag: Tpet_0349
• ID: 5170733
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 334177
• End bp: 334833
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640562853
• Product: hypothetical protein
• Protein accession: YP_001243954
• Protein GI: 148269494
• COG category: [S] Function unknown
• COG ID: [COG1655] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00317659
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGT TCTGGGAAAA AGAATTCACC TGCCCTTTCT GTGGAACGAA GTTCAAAAAG 
AAGATGGTCT TTTTCGACTC CATAAAGATC AAAGCCAGAG ATATCGACTT GAAACCTGTT 
TTTGAAGATG TGAACCCGAT GTTTTACGAA GTGGTGACCT GCCCGAACTG TTACTTTTCT 
GCGTTCGACA AAGATTTCGA GACCATCACC ATAAAAGGAG AAGAGACGGA AAGAAAGCTG 
AAAAAACTGC TCGAAGAAGC CAAGAAAAAG GTCGAATTGA AAAACGTGGA GAACCACGTG 
GAAGCGATCA AGCGCTACGC TTTGAGTGGA ATGGTGTACT CTGTTTTGAA CCAGAGAAAG 
AAAGTAGCGA TCTCTTATCT AAAGATCGCC TGGCTGTTCA GAGAGCTGGG AAAGTCAGAA 
GAAGAAAAGC GCTATCTCGA AAGAGCTTTG AAGGAATTCG AAAGCCACTA CAAGTACGAC 
TATTACCAAG AATCGGACGA ACCCATGATA CTCTTCTATC TGGGTGTTTT GAATCAAATC 
CTGGGCAACA GGAAAGAAGC CGCGAGGTGG TACGAACTCC TCCTGAGAAA GTACGACGGC 
AAATCCCTTT ACGCGAAGGT GGGGAGGGAA AGATGGCAGG AATTAAGAAG ATCTTAA 

 

Protein sequence

MSKFWEKEFT CPFCGTKFKK KMVFFDSIKI KARDIDLKPV FEDVNPMFYE VVTCPNCYFS 
AFDKDFETIT IKGEETERKL KKLLEEAKKK VELKNVENHV EAIKRYALSG MVYSVLNQRK 
KVAISYLKIA WLFRELGKSE EEKRYLERAL KEFESHYKYD YYQESDEPMI LFYLGVLNQI 
LGNRKEAARW YELLLRKYDG KSLYAKVGRE RWQELRRS