Gene Tpet_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0347 
Symbol 
ID5171309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp331803 
End bp333182 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content50% 
IMG OID640562851 
Productprotease Do 
Protein accessionYP_001243952 
Protein GI148269492 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.342826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TCTTTCTGAC CATCGCTGTG GTACTGATGC TCACCAGCGT CTTTCCATAC 
GTCAATCCCG ACTACGAAAG CCCCATCGTT AACGTGGTCG AAGCGTGTGC ACCGGCCGTT
GTGAAGATAG ATGTTGTGAA GACGGTGAAG ACTTCCTTCT TCGATCCTTA TTTTGAGCAG
TTCTTCAAAA AGTGGTTCGG TGAACTTCCA CCCGGTTTCG AAAGGCAGGT TGCCAGCCTC
GGATCGGGCT TCATCTTCGA CCCAGAAGGT TACATACTCA CAAACTACCA CGTGGTCGGT
GGAGCGGACA ACATCACTGT GACCATGCTC GACGGAAGCA AATACGACGC GGAGTACATA
GGAGGAGATG AAGAGCTCGA CATCGCGGTC ATAAAGATCA AAGCCAGCGA TAAGAAATTC
CCCTATCTGG AATTCGGTGA TTCTGACAAG GTAAAGATCG GCGAATGGGC GATAGCCATA
GGGAACCCCC TCGGCTTCCA GCACACGGTG ACTGTGGGAG TGGTCAGCGC TACCAACAGG
AGGATTCCAA AGCCAGATGG AAGTGGTTAC TACGTGGGAC TCATCCAGAC CGACGCGGCG
ATCAACCCGG GAAACAGCGG AGGACCCCTT CTGAACATAC ACGGTGAAGT GATAGGCATA
AATACGGCCA TCGTCAACCC TCAGGAAGCT GTGAACCTCG GTTTTGCCAT CCCGATCAAC
ACGGTGAAGA AGTTCCTCGA CACCATACTC ACCCAAAAGA AGGTTGAGAA GGCTTACCTC
GGTGTGACGG TCATGAACCT CACCGAAGAA ACGGCGAAAG CTCTGGGGCT TGAATCTACG
AGTGGTGCTC TGATAACGAG TGTTCAGAAA GGATCTCCCG CTGAAAAAGC CGGGCTCAAA
GAAGGGGACG TGATCCTCAA GGTTGACGAT CAGGATGTGA GAAGTCACGA AGAGTTGGTT
TCCATCATAC ACACTTACAA ACCGGGAGAC ACAGCCGTTC TCACCATAGA GAGAAAGGGA
AAGATCATGA AAGTTCAGGT GACGTTCGGT TCCTCATCTG AAGAAGAGAA AACAACGACT
GGTGAGGAAA AAATCGATGT TCTTGGCATC ACAGTGTCGA ACATCACGCC GGCCGACAGG
GAGACTTATT CGATCCCGGA AGAGATAAAC GGGGTCATAG TGAAGGAGAG CACCGGGAAG
TTCGGTCTAC AGAAGGGAGA CGTAATCACC ACAGTGTACG TGAACGGTAA AAGGTATGAT
ATAAACTCTG TAGAGGATCT CAAGAAAGTT ACATCCATTG TTAAAAATGG TGACTACATC
GCCCTTTACA TTTACAGGAA TGGAGCGAAA GTCTTCGTGA GCTTCATCTA TCAGAGATAG
 
Protein sequence
MKKFFLTIAV VLMLTSVFPY VNPDYESPIV NVVEACAPAV VKIDVVKTVK TSFFDPYFEQ 
FFKKWFGELP PGFERQVASL GSGFIFDPEG YILTNYHVVG GADNITVTML DGSKYDAEYI
GGDEELDIAV IKIKASDKKF PYLEFGDSDK VKIGEWAIAI GNPLGFQHTV TVGVVSATNR
RIPKPDGSGY YVGLIQTDAA INPGNSGGPL LNIHGEVIGI NTAIVNPQEA VNLGFAIPIN
TVKKFLDTIL TQKKVEKAYL GVTVMNLTEE TAKALGLEST SGALITSVQK GSPAEKAGLK
EGDVILKVDD QDVRSHEELV SIIHTYKPGD TAVLTIERKG KIMKVQVTFG SSSEEEKTTT
GEEKIDVLGI TVSNITPADR ETYSIPEEIN GVIVKESTGK FGLQKGDVIT TVYVNGKRYD
INSVEDLKKV TSIVKNGDYI ALYIYRNGAK VFVSFIYQR