| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0334 |
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| Symbol | |
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| ID | 5170235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 315002 |
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| End bp | 315709 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640562837 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001243939 |
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| Protein GI | 148269479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.589878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAC GGGCTGTCTA TTTCATTCTG CTCTTCAACG CGTTCATATT CGTGATGATG
ACCTTTTCTG GTGTTTTCTC GACCAGGGAT CCTGTTCTTC AGATGCTGCT TTTGTTGAGA
TACGGAGCGC AGTACGGTCC CAGAGTCGAC GCGGGAGACT GGTTCAGGTT GATCACCGCT
CTGTTCGTCC ACGGAGGAAT ACTCCACATA CTGTTCAATT CATACGCGCT TTACTACTTT
GGCCTGATCG TGGAGGATAT ATACGGAACG GAGAAGTTCC TGGTCGGTTA TTTCTTCACC
GGAATCGTGG GTAATCTGGC AACGCACGTG TTCTACCACG ACACAATCTC CGTCGGGGCT
AGTGGTGCCA TCTTTGGCCT CATCGGAATA CTCTTCGCGG CGGGTTTTCG AAAGGACACA
CCCTTCTTCA TGAAACCTGT GACCGGCATG TCGCTTCTTC CCATCATTCT GATCAACGTT
GTGTACGGAT TTCTCCCGGG CACGAACATC AACAACGCGG CTCATCTTGG AGGTTTCCTG
TCTGGAATGC TTCTTGGATA CACGATGAGA CCCTTCTCGT GGAAAAGGAG GACCCTCTGG
AGGGTCCTCG CGATAGTCGT CGTTTCGCTC GTCGTTCTCT CTTACGTTTT CCTGATTAGA
CAGATCCCGG AGATCGACGA AGCGATCAGA AGGTTCAAAG CAGGATGA
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| Protein sequence | MRKRAVYFIL LFNAFIFVMM TFSGVFSTRD PVLQMLLLLR YGAQYGPRVD AGDWFRLITA
LFVHGGILHI LFNSYALYYF GLIVEDIYGT EKFLVGYFFT GIVGNLATHV FYHDTISVGA
SGAIFGLIGI LFAAGFRKDT PFFMKPVTGM SLLPIILINV VYGFLPGTNI NNAAHLGGFL
SGMLLGYTMR PFSWKRRTLW RVLAIVVVSL VVLSYVFLIR QIPEIDEAIR RFKAG
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