Gene Tpet_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0318 
Symbol 
ID5171562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp296441 
End bp297784 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content51% 
IMG OID640562821 
Producthypothetical protein 
Protein accessionYP_001243923 
Protein GI148269463 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0384323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGA GGCTTGGAAT AGTCGGCTTT GGAGCGAGTG CCATCGGGTT CATCAACGGA 
CTCATAGAGA GTGGAAGGGT GAAAGACTAC AGGATCATCG TTCTGGAAAG GGGAAAAGAC
TACTCCCACA ACACCATCTC CGGTGTGAGG ATGGACGGGA AGATCTTCAT CTCCCACGGC
ATGGGAGGAG AGATCTACAT TCCTCTTGAA ATACAAGCGA AGACGGTGGA GTTCTACCTG
AAGTTTTCCG GCTACACTCC CACCGTCGAT AAAAGAGAAG GCATCGTGAA CTACCTGAAG
TCCTTCGAAA GGGATGGCAG GAAGATAGAG TTCGGAGAGT CCTTCTCGAA CGAAGAGATC
TACAAGCGCT TCTATCACCA CGGTTTCGAA CCGGTGAAGT CCTATTTCTT CCATCTGGGA
ACGGATATCC TGAAAGAGAC TAACAAGAAC ATATACGAGT ACTTCTCCTC CTTTGAGAAC
ATAGAGTTTT TCTTTGGAAC CGCTGTGGAG GATGTGGAGT TCGGCCCTCC CCACAGGGTG
CACACAAGCA GGGGAGAGTT CGAGTTCGAC GAGCTCGTGA TCGCCGTTGG AAGAAGCGGA
CACAGACTCA TGGAGCGTCT CAAAGAGAAA TATCCACAGC TTGTCAAGCC GAACCAGTTC
GTCGACATCG GTGTCAGGTA CGAACTCCCG AACCACGTGA TGGATCCATT CTCCGATATG
TACGAGGTGA AGGTTCGCTA CAGGACCAAA ACGGGTTACA TCTGCAGGAT CTTCTGCCAG
AATCCGGCAG GGAAGGTGAC ACTGGAAAAG TACGAAGACT TCACCACGGT GAACGGCTAT
TCTGACAGCC TGCATAAGAC GGAGAACACG AACTTCGCCA TTCTCGTCAC CACGCGCTTC
ACAGAGCCGT TCAAGGATCC CACGGGATAC GGTGTCAACC TCGCAAAGCT CGCAAACATC
TTAGCCGGCG ACAGAGAGAA GGTGATTCTG CAGACGTACG GGGATTTCAA AGAGTTCAGA
AGGACGAAGA GGCTCGGAAG GGTTCATCCC ACTCTGGATC CCGAAAGTTA CATTTTGGGA
GACGCGAATC TCGTCTTTCC GTCGAAGATC AGAGAATCCC TCGTGGATTT CGTGGAGAAC
CTGGAGAAGG TCATACCGGG GGCTTCCTAC TTCGACAACC TGCTCTACGC CGTCGAGGTG
AAGTTCTACA CGAACAAGTT CCTGAACGAC ATCGTGGAAG GTCTCCACGT GGTGGGAGAC
TGCTCCGGGT GGACCAGATC GATCCAGTAC GCCACCTCGA TGGGATACAT GAGAGCTGTT
GGAATGAAGA TTCAATCTCT GTGA
 
Protein sequence
MLKRLGIVGF GASAIGFING LIESGRVKDY RIIVLERGKD YSHNTISGVR MDGKIFISHG 
MGGEIYIPLE IQAKTVEFYL KFSGYTPTVD KREGIVNYLK SFERDGRKIE FGESFSNEEI
YKRFYHHGFE PVKSYFFHLG TDILKETNKN IYEYFSSFEN IEFFFGTAVE DVEFGPPHRV
HTSRGEFEFD ELVIAVGRSG HRLMERLKEK YPQLVKPNQF VDIGVRYELP NHVMDPFSDM
YEVKVRYRTK TGYICRIFCQ NPAGKVTLEK YEDFTTVNGY SDSLHKTENT NFAILVTTRF
TEPFKDPTGY GVNLAKLANI LAGDREKVIL QTYGDFKEFR RTKRLGRVHP TLDPESYILG
DANLVFPSKI RESLVDFVEN LEKVIPGASY FDNLLYAVEV KFYTNKFLND IVEGLHVVGD
CSGWTRSIQY ATSMGYMRAV GMKIQSL