| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0315 |
|---|
| Symbol | rpsF |
|---|
| ID | 5170957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 295143 |
|---|
| End bp | 295529 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640562818 |
|---|
| Product | 30S ribosomal protein S6 |
|---|
| Protein accession | YP_001243920 |
|---|
| Protein GI | 148269460 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000108359 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTTACG TGAAAGAGAG GATCTACGAG AGCATGTTCA TCATCGCACC GAACGTTCCA
GAGGAAGAGA GAGAAAATCT CGTCGAAAGA GTCAAGAAGA TCATCGAAGA AAGAGTCAAG
GGAAAGATCG AAAAAGTGGA AAGGATGGGT ATGAGAAAGT TCGCCTACGA GATCAAGAAG
TTCAGCGAAG GAGATTACAC GGTGATTTAC TTCAGGTGCG ATGGTCAGAA CCTTCAGGAG
CTGGAGAATT TCTACAGAGT GACACCCGAA ATCATCAGAT GGCAGACCTT CAGAAGGTTC
GATCTGGAAA AGAAAGAGAG AAAGGCGCAG AGAGAAAAGG CAGCTGCTGA AGCTGTCGAG
ACAGGTGAAG GAGGATCCGA AGCTTAA
|
|---|
| Protein sequence | MAYVKERIYE SMFIIAPNVP EEERENLVER VKKIIEERVK GKIEKVERMG MRKFAYEIKK
FSEGDYTVIY FRCDGQNLQE LENFYRVTPE IIRWQTFRRF DLEKKERKAQ REKAAAEAVE
TGEGGSEA
|
|---|
| |