| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0313 |
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| Symbol | rpsR |
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| ID | 5171541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 294476 |
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| End bp | 294703 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640562816 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001243918 |
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| Protein GI | 148269458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000570063 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTACA AGAGAAAAAG AAAGAAGGTC AAGAAGTGCA GACTCTGTGA AATGGAATTG
GACTACGTTG ATTATAAAGA CACAAGGCTT CTCAGTGAAT TTCTCACCGA CAAGGGAAAG
ATCATACCAA AGAGGCTCAC CGGAAACTGT TCAAAGCACC AGAGAATGGT GAAGGTAGCT
ATCAAGAGGG CAAGACAGAT GGGACTCCTT CCATACCTGA AGATATGA
|
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| Protein sequence | MAYKRKRKKV KKCRLCEMEL DYVDYKDTRL LSEFLTDKGK IIPKRLTGNC SKHQRMVKVA
IKRARQMGLL PYLKI
|
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