Gene Tpet_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0308 
Symbol 
ID5170408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp290245 
End bp291303 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content44% 
IMG OID640562811 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001243913 
Protein GI148269453 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0141108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAGTAC TCTCACTGGT CGGTGCAAGG CCTCAGATCA TAAAAGAGGC GATGCTTCAC 
AGGGAATTCA AAGAGAAGGG GATAGAGGAG ATCCTCGTTC ACTCCGGACA GCACTACGAC 
TACAACATGT CAGATGTGTT CTTTGAAGTT CTTGAAATCA GACAACCTCA TTACAATCTC 
AACGTGGGAT CTGGAACACA TGGAGAAATG ACGGGAAAGA TCATGATCGA GTTTGAAAAG 
GTTCTCCTCA GGGAAAAACC TGATCTTGTT CTGGTTTACG GTGACACCAA CACGACTCTG 
GCTGGCGCGC TCGTGGCTGC AAAACTCAAA ATACCTGTCG CACACGTTGA GGCAGGGTTG 
AGACAGCATC CCAAAGACAT GCCCGAGGAG ATAAACAGGA TCGTCACAGA TCGAGTCTCT 
CAGATTCTTT TCTGTCCCAG TGAACTTGCC GTGGAGAACC TGAGAAAAGA AGGCATTACA 
GAAGGTGTTT ATTTCACCTG TGATGTGATG TATGACTTAT TTTTGAAAAT GAAGCCGCTG 
TTTAGATATG ATTTGTTCAG AACGCTGGGT TTAAAAGAAA ACGGGTACAT TGTATGTACG 
ATACATAGGG ATTTCAACAC AGATGTTCCA GAAAGATTGA GAGAAATACT TGAGCAGCTC 
AGAAGATTAT CGAAGAGATA TGAGGTAGTA TTTCCAGTGC ATCCTCGAAC TGCAAAAAGA 
ATAAGAGAAT TTGGACTGGC TGAATTGCTA AATGAAATCC TTGTGATAGA ACCTGCCGAC 
TATCTCAACA TGATGGGCCT GATAGAGAAA AGCAGATTTG TGATAACAGA CTCTGGAGGA 
CTGCAGAAAG AAGCCTACTG GTGTGGGAAA AGAGCGATAG TGGTGATGCC AGACACAGGC 
TGGAGAGAAC TCGTCGAGGC AGGCTGGAAC GTTTTGAGTG AACCAGATGA GATCACAGAA 
AAATCAGAGT ATATTGACAA TCATGTCAGT CTTCCAGAGA ATGTCTATGG TGAGGGCAAT 
GCCAGTGAAA AGCTCGCAGA AGTGATCCTT CAACTCTAG
 
Protein sequence
MRVLSLVGAR PQIIKEAMLH REFKEKGIEE ILVHSGQHYD YNMSDVFFEV LEIRQPHYNL 
NVGSGTHGEM TGKIMIEFEK VLLREKPDLV LVYGDTNTTL AGALVAAKLK IPVAHVEAGL 
RQHPKDMPEE INRIVTDRVS QILFCPSELA VENLRKEGIT EGVYFTCDVM YDLFLKMKPL 
FRYDLFRTLG LKENGYIVCT IHRDFNTDVP ERLREILEQL RRLSKRYEVV FPVHPRTAKR 
IREFGLAELL NEILVIEPAD YLNMMGLIEK SRFVITDSGG LQKEAYWCGK RAIVVMPDTG 
WRELVEAGWN VLSEPDEITE KSEYIDNHVS LPENVYGEGN ASEKLAEVIL QL