| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0290 |
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| Symbol | |
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| ID | 5170867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 274216 |
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| End bp | 277194 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640562793 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001243895 |
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| Protein GI | 148269435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG TGCTGATCTT TCTGTTTCTC TTAGCTGCGG TGTTTTCTCT ATCTTACACC
ATAAGAAAGG GAGACGTTCT GAGAGTAGAA GTGGTGGGAT ACCCGGACCT GACGAGAAAT
TGCGCGGTGG ACATAGAAGG AGCGATCACT TTTCCGTACG TGGGACGTGT GAAGGTGGAA
GGCCTCAGTG TGGACCAGGT GACAGAGTTT CTCAAAGAGA GGCTCTCCAA GAGTTTTTCT
GATCCTGAGG TGATCGTGTC TCTTCAGCAG ATCGCACCAA GGAACGTCTA CGTCTCCGGT
GTTGTGAACA GAGTGGTGGA CATGGGAATA GAAGATCTCA GCGTTTCTGA GCTTCTCTCT
CTTCTCTCTG TGGATCTTTC CTCCGTTGAC CTTTCGAAGG TGAAGGTCCT CAGGGATGGG
AAGGTCTTTG AACTGGATCT CTCCTCGCTT CTCTGGGGAG AAGCTCCCGA TAAGGACGTG
GTGCTCCAGG AAGACGATCA GGTGATACTT CCAGAAAAGA GCTACACGGA GTTCGTGAAG
GTCGTTGGGG CTGTGGCAAA GCCCGGGATC TACCCCTACA GAAGAGAGAT GACCCTGCTC
GACGCCATCG CGGCAGCGGG TGGCACCACG CAGGAGAGTT CAGGAAAGAT AATCGTCCTC
TCGAAGGACC AAACGACCGA GATATCTGAG AAAGATCTCT ATCAAAAGAA CCTTCTTCTG
AAGCCGGGAG ATACGGTGCA CGTTCAAAAG CTCGACGAGA GGTTCGCTTA CGTTGTGGGA
GCGGTGGCAA GACCGGGGAT GTACACCTTC TCCAGAGAAG AGTCTCTCAC ACTCAAGAAT
CTCGTGGCGA AGGCCGGTGG CACCTCCGTT GAGGACAGGT ACATAGAAAA GGTTCTGATC
ACAAGGGATG GAAAGACCAC CGAGTACACA CCGGAAGTGC TGAACGAAAA CGTTCAGCTG
AATGTCGGAG ATGTCGTTGA GATAAAGAAG TACGAAGAAA CGAGGGTTTA CGTATCTGGA
TACGTCTCAA GACCCGGTGT TTACGAGATC TCCCCGAAAG AGTCGGTGAC CTTAGAAAAG
CTCCTCTCGA TGGTGGGAGG GTTCAAGGGA AGTGTGGAGG GAGTCGATTC GATCGTCATC
ACAAGAGATG GGAGTGTCAT AGAGCTCTCA CCAAGCGAGC TGGACTTTCC GGTGAAACCG
GGTGACATTG TGAACGTGAA GGAGTTCGTT CCGAAGAAGG CCTACATCCT CGGATACGTG
AGAAATCCTG GACTTTACAC CTTTGGAAAG GGCGAGGCGT TCACACTGAG AAACCTCATA
GCGAAGGCCG GTGGTTTCAT CGATGAAAAT CAGGTTGTCT CCGTGAAACT GTCTGGAAAG
GAATACTCGC CGGATGAGAT CGTGAAGATC GATATCCTGC TCGAAGATGG CGTGTTCGTC
TACGTGGAGA AGTACACGGA CAGGTTCGTT TACATGGTGG GAGACAATAC CGCGAGGAAC
GGAAGGATGA GCTTTGCAAA AGACGAACCG TTCACTCTCT CGACGGCCCT GAAGAAGTAC
GGTATCGAGG ATTTCTCTCT TGTGAAGAGT CTTTCACTTT TGAGAGACGG CGAGGAGAAG
ATCTTTGATC CGAAGAAGAT ATTGACGGAG GATGTTTCCC TCAAGACCGG TGACACGGTT
CTCGTGAAGA CCGTTCAGGC GAAAAGGGTC TATTTCACCG GAGACGTGTA CGGATACGTC
GATTTCACTA AGGACGAAGA CATCACGCTC GAAAAGGCCC TCGCAAGGTT TGGAAAGATA
CAGAAGAAGT ACATCGCGGG ATTGAAGGTT CACTCAAACG GAAAAGTGCA GGAGCTGACG
GAAGTTGCCG ATCTTCCGCT CGAAGACGGC GCAGTTGTCG AGGTGGACGT GAAAGAGGCC
GTCAGGGTGT ATGTGGACGG CTTCGTGAAA GTTCCTCAGA TGGTTGTCTT TGAGCCCGAT
GAACCGGTAC TCCTGGACAG GGCCATTGTG AAAGCCGGAG GATACAAAGA AGACGCTCTC
TTCGAAGCGG GAGACGTCGT TGTTCTGAGG GACGGCGGTG AGATCAACGT TCCCGAAAAC
CAGCTGAGTT CGTTCGAGCT GAAGGACGGC GACCTCGTGT ACGTGAAGTA CACCGAAAGA
CCACACGTTT ACGTCTTCGG AGAAGGTATC ACGAACACGC TTGTGACCTT CAGGGACGAA
GAGACGCCTA CACTCAGGAA CGTTCTGGGC AAGGTGTGGG GCATAAAGAG CACAGGATCG
AGAAAGATCG TCGTTGTGAG TCCATCGGGA GAGAAGAAAG AAGTGGACTA TGAAGACGTG
ATCAACACGG GCGGTCCTGT TCTCGAGAGT GGAAGCGTGG TCTTCGTGCC TCTCGAGACG
GAGAACTTCG CCTACGTTGT GGGAGAGGTG GCAAGGCCCG GTGCGTACGA ACTCAAAGGA
GATGTGACAC TTCTCAAACT CATCGCACAG GCCGGGGGCT TGAGCAACTG GGCGCTGAAG
ACGAAGGTGA TCTTGAGAAG GGGAGAAAAC GAGACAGCCT ACGACTTCAC GAACATGGAC
GAGGTGCAGA AAGTAAAGAT AGAGCCGGGG GACGTGGTGT ACGTGCCACC CGTTGAGACG
AACTACGTGT ACGTGCTCGG TAATGTGAGA ACACCAGGTA TCGTGAAGGT AGACAGGTAC
TCGACGGTGT TCGATGTGGT GATGAGGGCC GGTGGGTTCA CAGACAGGGC CGCCACGGGA
AGGATATTCC TCTTCAAAGG AGGGCCTCAG GGAGAGGTCA CCGTCTGCGA TCTCTCCGGA
GTTCTCTCTG GAAAGGGTGG AGGAGTGAAC CCGAACGTCG CGCCGGGTGA TGTGGTCTTC
GTTCCCGACA ACCCGCTCAT ACAGGTGACA GAAGCGCTCT CCATAGTGAA CACCATCCTG
AACACGATAA GCAACGTCAG AGACTTCATG GGGTGGTAA
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| Protein sequence | MKRVLIFLFL LAAVFSLSYT IRKGDVLRVE VVGYPDLTRN CAVDIEGAIT FPYVGRVKVE
GLSVDQVTEF LKERLSKSFS DPEVIVSLQQ IAPRNVYVSG VVNRVVDMGI EDLSVSELLS
LLSVDLSSVD LSKVKVLRDG KVFELDLSSL LWGEAPDKDV VLQEDDQVIL PEKSYTEFVK
VVGAVAKPGI YPYRREMTLL DAIAAAGGTT QESSGKIIVL SKDQTTEISE KDLYQKNLLL
KPGDTVHVQK LDERFAYVVG AVARPGMYTF SREESLTLKN LVAKAGGTSV EDRYIEKVLI
TRDGKTTEYT PEVLNENVQL NVGDVVEIKK YEETRVYVSG YVSRPGVYEI SPKESVTLEK
LLSMVGGFKG SVEGVDSIVI TRDGSVIELS PSELDFPVKP GDIVNVKEFV PKKAYILGYV
RNPGLYTFGK GEAFTLRNLI AKAGGFIDEN QVVSVKLSGK EYSPDEIVKI DILLEDGVFV
YVEKYTDRFV YMVGDNTARN GRMSFAKDEP FTLSTALKKY GIEDFSLVKS LSLLRDGEEK
IFDPKKILTE DVSLKTGDTV LVKTVQAKRV YFTGDVYGYV DFTKDEDITL EKALARFGKI
QKKYIAGLKV HSNGKVQELT EVADLPLEDG AVVEVDVKEA VRVYVDGFVK VPQMVVFEPD
EPVLLDRAIV KAGGYKEDAL FEAGDVVVLR DGGEINVPEN QLSSFELKDG DLVYVKYTER
PHVYVFGEGI TNTLVTFRDE ETPTLRNVLG KVWGIKSTGS RKIVVVSPSG EKKEVDYEDV
INTGGPVLES GSVVFVPLET ENFAYVVGEV ARPGAYELKG DVTLLKLIAQ AGGLSNWALK
TKVILRRGEN ETAYDFTNMD EVQKVKIEPG DVVYVPPVET NYVYVLGNVR TPGIVKVDRY
STVFDVVMRA GGFTDRAATG RIFLFKGGPQ GEVTVCDLSG VLSGKGGGVN PNVAPGDVVF
VPDNPLIQVT EALSIVNTIL NTISNVRDFM GW
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