Gene Tpet_0283 details

Gene Information

• Locus tag: Tpet_0283
• ID: 5170058
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: -
• Start bp: 266117
• End bp: 266599
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640562786
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_001243888
• Protein GI: 148269428
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCATCG GTTTTGGATA CGACAGACAT CCACTCGTTG AGGGAAGAAA ACTTGTTCTG 
GCAGGTGTGG AGATAGACTC CCCCGTGGGA AGTCTCGGGC ACTCGGATGG GGATGTTCTC 
TCACACGCGA TCATAGATGC CCTGCTCGGT GCTGCTGGTC TTGGCGACAT AGGAACGTGG 
TTTCCGGAGA CGGAGGAGTA CAAAGACGCG AACAGTCTTG AGCTTCTGAA GAAGACGATG 
GATATGATAG AGGAAAGAGG GTTCAAGGTG ATAAACGTTG ACTCGACGGT TGTTCTCTCC 
GGTGTGAGAC TGTCGACCTA CAGAGACAGA ATCCTCGAAA ATCTGAAAAG CGTGTTGAAA 
ACTCCTCACG TGAACGTGAA GTTCAAGAGC GGAAACACAC TGGGGTTCGA AGGGGAAGGC 
AGAGGCATTT CGGCTTACGC GGTGTGCCTT GTAGAGGAGA AAGAATGTAC GAAGAGTACA 
TAA 

 

Protein sequence

MFIGFGYDRH PLVEGRKLVL AGVEIDSPVG SLGHSDGDVL SHAIIDALLG AAGLGDIGTW 
FPETEEYKDA NSLELLKKTM DMIEERGFKV INVDSTVVLS GVRLSTYRDR ILENLKSVLK 
TPHVNVKFKS GNTLGFEGEG RGISAYAVCL VEEKECTKST