| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0277 |
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| Symbol | |
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| ID | 5170309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 261178 |
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| End bp | 262068 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640562780 |
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| Product | spermidine synthase |
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| Protein accession | YP_001243882 |
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| Protein GI | 148269422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.173175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAGT TGAAAGAATT TGAAAGAGAT CTCCAGCCAA GACAGCACCT GTGGTACTTC
GAGTACTATA CAGGAAACAA CGTGGGACTC TTCATGAAGA TAAACCGCAT GATCTACTCC
GGACAGAGCG ACATTCAGAG GATAGATATC TTCGAGAATC CCGATCTTGG CGTGGTTTTT
TCGCTCGACG GCATCACGAT GACCACGGAA AAGGACGAGT TCATGTACCA CGAAATGCTC
GCACACGTTC CCATGTTCCT CCATCCGAAC CCGAAGAAGG TGCTCATCAT CGGCGGTGGA
GACGGCGGAA CGCTCAGAGA AGTCCTGAAA CACGACAGCG TGGAGAAGGC GGTTCTCTGC
GAAGTGGACG GACTCGTCAT AGAAGCCGCA AGGAAGTATT TGAAGCAGAC TTCGTGCGGT
TTCGACGATC CAAGGACAGA GATCGTGATC GCAAACGGTG CCGAATACGT GAGGAAGTTC
AAGAACGAGT TCGATGTCAT CATCATAGAC TCCACGGACC CGACGGCGGG CCAGGGTGGG
CACCTCTTCA CCGAAGAGTT CTACCAGGCC TGTTACGATG CCCTCAAGGA AGACGGAGTC
TTCTCCGCCG AGACGGAAGA CCCGTTCTAC GACATCGGAT GGTTCAAGCT CGCTTACAAG
AGGATCAGCA AGGTCTTTCC TATCACGAAG GTTTACCTTG GATTCATGAC CACCTATCCC
TCCGGCATGT GGTCCTACAC CTTCGCCTCC AAGGGAATAG ACCCGATAAA AGACTTCAAC
CCCGAAAAGG TGAAAAACTT CAACAAAGAG CTGAAGTACT ACAACGAAGA AGTTCACGTC
GCGTCCTTCG CCCTTCCGAA CTTCGTGAAG AAAGAACTCG GACTGATGTG A
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| Protein sequence | MEKLKEFERD LQPRQHLWYF EYYTGNNVGL FMKINRMIYS GQSDIQRIDI FENPDLGVVF
SLDGITMTTE KDEFMYHEML AHVPMFLHPN PKKVLIIGGG DGGTLREVLK HDSVEKAVLC
EVDGLVIEAA RKYLKQTSCG FDDPRTEIVI ANGAEYVRKF KNEFDVIIID STDPTAGQGG
HLFTEEFYQA CYDALKEDGV FSAETEDPFY DIGWFKLAYK RISKVFPITK VYLGFMTTYP
SGMWSYTFAS KGIDPIKDFN PEKVKNFNKE LKYYNEEVHV ASFALPNFVK KELGLM
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