Gene Tpet_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0273 
Symbol 
ID5171366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp259024 
End bp259419 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content48% 
IMG OID640562776 
Productsuperoxide reductase 
Protein accessionYP_001243878 
Protein GI148269418 
COG category[C] Energy production and conversion 
COG ID[COG2033] Desulfoferrodoxin 
TIGRFAM ID[TIGR00332] desulfoferrodoxin ferrous iron-binding domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000183471 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT CTGATTTCAT CAAGACGGAA GATTTCAAGA AGGAAAAGCA CGTTCCGGTC 
ATAGAAGCAC CCGAGAAGGT GAAAAAAGAC GAAAAAGTTC AAATCGTGGT TACCGTGGGA
AAGGAGATCC CGCACCCGAA CACAACAGAA CACCACATCA GGTGGATCAA AGTTTTCTTC
CAACCTGATG GTGATCCATA CGTTTACGAG GTGGGAAGGT ACGAGTTCAA CGCGCACGGA
GAGTCCGTTC AGGGGCCGAA CATCGGCGCT GTTTACACAG AGCCTACTGT CACAACCGTG
GTAAAATTGA ACAGATCGGG AACGATCATA GCCCTCTCCT ACTGCAACAT ACACGGCCTC
TGGGAAAGCA GTCAAAAGAT CACTGTTGAA GAGTGA
 
Protein sequence
MKLSDFIKTE DFKKEKHVPV IEAPEKVKKD EKVQIVVTVG KEIPHPNTTE HHIRWIKVFF 
QPDGDPYVYE VGRYEFNAHG ESVQGPNIGA VYTEPTVTTV VKLNRSGTII ALSYCNIHGL
WESSQKITVE E