Gene Tpet_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0258 
Symbol 
ID5171059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp246574 
End bp247248 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID640562761 
Productflagellar hook capping protein 
Protein accessionYP_001243863 
Protein GI148269403 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCTACG ACATGAGCGG TATATACCTT TCTTCTCTTA CAGGAGTAAG AAATAATTCC 
AGCTCTTCGA GTAATTCTCT CGACAAGGAA GCTTTTCTCA GACTCCTTCT TCAAGAACTG 
GAAATGCAGG ATCCACTGGA GCCCATGGAA ACGAAGGACA TGATATCTCA GCTTTCTCAG 
CTCGCGAGCC TTGAACAGAT CACAAACCTC ACCAGTGCGG TGAAAGATTT CGTCGAAGCT 
CAGACGAGTG TGAACCCAGC CCAGCTTGCT TCTCTGATAG GAAAGTACGT CGTGGTGAAG 
AACAACACGG TAAATCTTGT AGACGGTCAG TCAGACAGCA TCATATTCAA CGTGGATGAA 
GATGCACATG TTGTGGTTCA AATACTTGAC GAAAACGGAA AAGTGGTGAG AACAGAAGAT 
CTTGGAACTG TTCAGGCGGG AGTTCACGCC TGGCAGTGGG ATGGAAGAGA TGACAGCGGG 
ATCAGTGTTG AAGATGGCAG TTACACTTAC CATATTTATA AACTCACATC GAGCGGACTG 
GAGGAAATAG GAGGAATGGA AGGCGGAGTG GTGGAAGCCG TTCAGATAAA GAATGGAGAG 
GGATTCGTTC TTGTGAACGG TTCACTCTAT CCTGTTGATT CTATCCTGGA GATCTCTCAG 
GAGGGTGATG CGTGA
 
Protein sequence
MIYDMSGIYL SSLTGVRNNS SSSSNSLDKE AFLRLLLQEL EMQDPLEPME TKDMISQLSQ 
LASLEQITNL TSAVKDFVEA QTSVNPAQLA SLIGKYVVVK NNTVNLVDGQ SDSIIFNVDE 
DAHVVVQILD ENGKVVRTED LGTVQAGVHA WQWDGRDDSG ISVEDGSYTY HIYKLTSSGL 
EEIGGMEGGV VEAVQIKNGE GFVLVNGSLY PVDSILEISQ EGDA