| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0257 |
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| Symbol | |
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| ID | 5171294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 244703 |
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| End bp | 246574 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562760 |
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| Product | hypothetical protein |
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| Protein accession | YP_001243862 |
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| Protein GI | 148269402 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE
[COG4786] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR02489] flagellar hook protein FlgE, epsilon proteobacterial
[TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGGT CACTCTACAG TGGCATAACG GGTCTCAAAA ACTTCCAGGT AGCGATGGAT
GTTGTAGGAA ACAACATCTC CAACGTGAAC ACAGTTGGGT TCAAAGCGTC ACGGGTGAAT
TTCGAGACGA TGCTCGCTCA GACGATCAAG GCGGGAAGAT CTCCTCAGGA AAACGTGGGC
GGTACAAATC CCATGCAGAT AGGTCTTGGT TCTCAGGTGT CCAGTATCGA CAAGATCATG
ACGCAGGGCT CGTTCCAGAA CACGGGTGTG AAAACCGACC TTGCCATTCA GGGAGACGGG
TTCTTCATCG TATCAGATGG CAGTTCCTAT TATTACACAA GAGCCGGCGC ATTCACTCTG
GACAGCAACG GAAACCTGAT TCAGACCTCT ACTGGTTACA AGGTTCAGGG ATGGACAGCT
GTTCAGGATC CAGAGACCGG TGAAAGGTAC ATCGACACCA ACAAACCCAT AGGGGATCTG
GTGATCAGTG CAGGTATGAC GATGCCGGCA AAGAAAACTT CGAACGTTCG TTTTGAAGGA
AATTTGAACT CCAAATTGGG ACCTGGTTCG TTCGTCATCA CTTTAACTGA TGAAAATGGA
ATTAATCACG ATGTCAGGGT GTGGTTTGAA AAGACACAGA GTGATCTGGG AACAGATCCG
TTCAGTTCTT CTCAGAGGTA CACGATGAAG ATCGATATCG ACAACGATGG AACAGCCGAT
GTGGATGGTT ACATGGTGTT CAACGAATTT GGAAGAGTGG AAGAGGCCGG GGTGTACGCT
GAATCTCAGG TCATAACGGC AACCACCGAT GGAAGTATTT CTGGAAGCAC AGCTCTACCA
GATGGCACCT ATCAGGCCAT CGTTCTGGAT TCTTCTGGAA ATGTGGTGTA CAACGGTACC
ACGACGGTTT CAGGTGGTAG TTTCACAATC AACGATTCTG ACATCACAGC TGGAAACAAT
TACACCGTGA TACTCTTAAC CCCAAACAAC GCATCAAATT CTCTCACAAT AGCACCCGGT
GCTGAACTTG TCATTCCTAC CTCCGGTGAG CCCAGGTTCT ACGAATCAGA CAATCCGACG
AATTTCGTTC AAACTGATTA CACTTCTCCA AGGTACACCA CCGCCGTCCA GGTTTACGAT
TCTCTTGGAA ACGCGTACAC CGTTTACTAT GAATTTGTCA GACTTGGAAA CACCACTATT
GGTTCAGAAA GTTTCAAGAA CGCCTGGATC TGGAGAGCGT ATACGGATAG TGGAGAACCG
ATCTCACTGA TCGATGAAGA CGGTGGTAGT GGCTATGTAG CGGGGTTGAT AGATTTCGAT
GAATCAGGAA GACCCATTCA ATACAGAGGG CTGGACTCTT CATACAATCT CAGCTCTGGA
GAGGTTAGAA CGATCCAGTT TGATGCAGGT CAGAGTGGAG ATGGGGTGGT AACAATAACA
GCTGATTTTT CCGGAGCAAC TCAGTTCTCC GGCGACAGCA CTCTGAACAT TCCATGGCAG
GATGGAAATC CGATGGGTGT TTTGGAATCC TTCGCCATAA ACGAGCAGGG AGAGATCATA
GGAACCTTCA GCAACGGACT CACCGACGTT CTTGGACAGA TCGCCCTCGC AGTGTTTAAC
AATCCTTCGG GACTCTCAGA GGTTGGTAAT TCGCTCTACG TCGTGTCTGC CAACAGCGGC
GTTCCAAAGA TAGGAGCCCC CGGTAGCGGT GGAAGAGGAA TTTTGATCCC CGGTGCCCTT
GAGATGTCCA ACGTGGATCT TGCGGAAGAG TTCACCAAGA TGATCGTCGC ACAGAGAGGT
TTCCAGGCGA ACGCGCGTGT TATCACGACA GCCGATCAGA TTCTGAACGA ACTTGTGAAC
ATCAAGAGAT GA
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| Protein sequence | MMRSLYSGIT GLKNFQVAMD VVGNNISNVN TVGFKASRVN FETMLAQTIK AGRSPQENVG
GTNPMQIGLG SQVSSIDKIM TQGSFQNTGV KTDLAIQGDG FFIVSDGSSY YYTRAGAFTL
DSNGNLIQTS TGYKVQGWTA VQDPETGERY IDTNKPIGDL VISAGMTMPA KKTSNVRFEG
NLNSKLGPGS FVITLTDENG INHDVRVWFE KTQSDLGTDP FSSSQRYTMK IDIDNDGTAD
VDGYMVFNEF GRVEEAGVYA ESQVITATTD GSISGSTALP DGTYQAIVLD SSGNVVYNGT
TTVSGGSFTI NDSDITAGNN YTVILLTPNN ASNSLTIAPG AELVIPTSGE PRFYESDNPT
NFVQTDYTSP RYTTAVQVYD SLGNAYTVYY EFVRLGNTTI GSESFKNAWI WRAYTDSGEP
ISLIDEDGGS GYVAGLIDFD ESGRPIQYRG LDSSYNLSSG EVRTIQFDAG QSGDGVVTIT
ADFSGATQFS GDSTLNIPWQ DGNPMGVLES FAINEQGEII GTFSNGLTDV LGQIALAVFN
NPSGLSEVGN SLYVVSANSG VPKIGAPGSG GRGILIPGAL EMSNVDLAEE FTKMIVAQRG
FQANARVITT ADQILNELVN IKR
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