Gene Tpet_0243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0243 
Symbol 
ID5171798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp233991 
End bp234992 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content50% 
IMG OID640562746 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001243848 
Protein GI148269388 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAG TGGCTATTAA CGGTTTCGGT AGGATAGGAA GGATTGTCTA CAGGATCATC 
TACGAAAGAA AGAACCCCGA TATCGAAGTA GTGGCCATCA ACGATTTGAC AGACACCAAG 
ACCCTCGCAT ACCTTCTGAA GTACGACTCC GTTCACAAGA AGTTCCCCGG TAAAGTCGAG 
TACACCGAGA ACTCTCTGAT CATCGACGGA AAAGAGATCA AGGTCTTCGC GGAACCCGAT 
CCTTCGAAAC TTCCCTGGAA AGACCTCGGT GTTGACTTCG TGATCGAATC CACCGGTGTC 
TTCAGAAACA GAGAAAAGGC AGAACTTCAC CTGCAGGCTG GAGCGAAGAA AGTCATCATC 
ACAGCGCCCG CTAAGGGAGA AGACATCACC GTTGTTATCG GTTGTAACGA AGATCAGCTG 
AAACCCGAAC ACACCATCAT CTCCTGTGCG TCCTGTACAA CCAATTCCAT CGCCCCCATC 
GTGAAGGTGC TCCATGAGAA GTTCGGAATC GTCAGCGGAA TGCTCACGAC CGTTCACTCT 
TACACGAACG ACCAGAGAGT GCTCGATCTG CCTCACAAAG ATCTGAGAAG GGCAAGAGCA 
GCTGCGGTGA ACATCATCCC GACAACCACG GGTGCCGCAA AAGCAGTTGC ACTCGTTGTT 
CCTGAAGTGA AGGGTAAACT CGATGGTCTC GCTCTCAGAG TCCCAACTCC CGACGGATCC 
ATCACCGATC TCACAGTACT GGTCGAAAGA GAAACCACGA TTGAAGAAGT CAACGCCGTC 
ATGAAAGAAG CCACAGAAGG AAGGCTCAAG GGAATCATCG GATACAACGA TGAACCCATT 
GTGAGCAGCG ACATCATCGG AACGACGTTT TCTGGTATCT TCGATGCCAC ACTCACCAAC 
GTTATCGGTG GAAAACTCGT GAAAGTGGCT TCCTGGTACG ACAACGAGTA CGGATACAGC 
AACAGAGTTG TCGATACACT CGAACTGCTC CTCAAGATGT GA
 
Protein sequence
MARVAINGFG RIGRIVYRII YERKNPDIEV VAINDLTDTK TLAYLLKYDS VHKKFPGKVE 
YTENSLIIDG KEIKVFAEPD PSKLPWKDLG VDFVIESTGV FRNREKAELH LQAGAKKVII 
TAPAKGEDIT VVIGCNEDQL KPEHTIISCA SCTTNSIAPI VKVLHEKFGI VSGMLTTVHS 
YTNDQRVLDL PHKDLRRARA AAVNIIPTTT GAAKAVALVV PEVKGKLDGL ALRVPTPDGS 
ITDLTVLVER ETTIEEVNAV MKEATEGRLK GIIGYNDEPI VSSDIIGTTF SGIFDATLTN 
VIGGKLVKVA SWYDNEYGYS NRVVDTLELL LKM