Gene Tpet_0242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0242 
Symbolpgk 
ID5171355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp232739 
End bp233938 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content50% 
IMG OID640562745 
Productphosphoglycerate kinase 
Protein accessionYP_001243847 
Protein GI148269387 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TGACCATAAA GGACGTTGAT CTGAAAGGCA AAAGAGTCAT AATGAGAGTG 
GACTTCAATG TTCCAGTGAA GGATGGAGTC GTTCAGGACG ACACGAGAAT AAGAGCCGCC
CTTCCAACGA TAAAGTACGC TCTCGAACAG GGTGCAAAGG TGATACTCCT GTCCCATCTT
GGAAGGCCCA AGGGAGAACC TTCGCCGGAG TTCAGCCTCG CACCTGTCGC CAAGAGGCTC
TCCGAGCTTC TTGGAAAAGA AGTGAAGTTT GTCCCCGCAG TTGTCGGTGA CGAGGTGAAA
AAGGCCGTTG AAGAGCTCAA AGAGGGAGAA GTTCTCCTCC TTGAAAACAC CAGATTTCAT
CCGGGAGAGA CCAAGAACGA TCCTGAACTT GCAAAGTTCT GGGCTAGCCT CGCCGATATC
CACGTGAACG ATGCCTTTGG AACAGCGCAC AGGGCGCACG CTTCCAACGT TGGGATTGCG
CAGTTCATTC CCAGCGTAGC GGGATTCCTT ATGGAAAAAG AGATAAAGTT CCTTTCCAAA
GTGACTTACA ATCCAGAAAA ACCGTACGTT GTGGTTCTTG GAGGGGCAAA GGTATCTGAC
AAGATCGGTG TCATCACGAA CCTCATGGAA AAAGCCGACA GAATTCTCAT AGGTGGAGCC
ATGATGTTCA CCTTCCTGAA GGCTCTTGGC AAAGAGGTTG GATCGTCCAG GGTTGAAGAA
GACAAGATCG ACCTTGCAAA GGAACTCCTC GAAAAAGCGA AAGAAAAAGG TGTTGAGATC
GTTCTTCCCG TCGATACTGT CATTGCTCAG AAGATAGAGC CCGGTGTGGA AAAGAAGGTT
GTCAGAATCG ACGACGGAAT ACCCGAAGGA TGGATGGGAC TCGACATCGG ACCTGAGACA
GTAGAACTCT TCAAGCAGAA GCTCTCCGAT GCCAAAACCG TTGTCTGGAA CGGGCCTATG
GGAGTCTTTG AAATCGACGA TTTCGCTGAG GGTACAAAGC AGGTCGCACT TGCAATTGCG
GCGCTCACGG AAAAGGGAGC GATCACCGTT GTGGGTGGAG GAGACAGCGC AGCGGCGGTG
AACAAGTTCG GTCTGGAAGA CAGATTCTCC CACGTTTCAA CGGGTGGAGG GGCTTCTCTC
GAATTCCTTG AAGGAAAAGA ACTTCCTGGC ATTGCCAGCA TCGCGGATAA AAAAAAATAA
 
Protein sequence
MEKMTIKDVD LKGKRVIMRV DFNVPVKDGV VQDDTRIRAA LPTIKYALEQ GAKVILLSHL 
GRPKGEPSPE FSLAPVAKRL SELLGKEVKF VPAVVGDEVK KAVEELKEGE VLLLENTRFH
PGETKNDPEL AKFWASLADI HVNDAFGTAH RAHASNVGIA QFIPSVAGFL MEKEIKFLSK
VTYNPEKPYV VVLGGAKVSD KIGVITNLME KADRILIGGA MMFTFLKALG KEVGSSRVEE
DKIDLAKELL EKAKEKGVEI VLPVDTVIAQ KIEPGVEKKV VRIDDGIPEG WMGLDIGPET
VELFKQKLSD AKTVVWNGPM GVFEIDDFAE GTKQVALAIA ALTEKGAITV VGGGDSAAAV
NKFGLEDRFS HVSTGGGASL EFLEGKELPG IASIADKKK