| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0235 |
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| Symbol | clpP |
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| ID | 5171792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 228162 |
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| End bp | 228773 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640562738 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001243840 |
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| Protein GI | 148269380 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGTGA AGGAAAAGAA GATAATTGAT CAATACGTTC CCATAGTCGT TGAGTCTACG
GGAAGGTACG AGAGAGCCTA CGACATCTTC TCGAGGCTCC TAAAGGACAG AATAGTTTTC
CTCGGATCCC CCATAGACGA CTATGTTGCA AACCTGGTCA TAGCTCAACT TCTGTTTCTT
GAGGCGGAGG ATCCGGATAA AGACGTCTAC CTCTACATAA ACTCCCCCGG AGGTTCTGTG
ACGGCGGGAC TCGCTATCTA CGATACGATG CAGTACATAA AGTGTGATGT CTCAACCATA
TGTGTAGGAC AGGCGGCTTC CATGGCGGCT GTGCTCCTCG CAGCCGGTGC AAAGGGAAAA
AGGTACGCGC TTCCGAACGC TCGAATAATG ATACACCAGC CGCTCGGTGG TGCTGAGGGA
CCTGCCAAGG ATGTGGAGAT CATCACGAGA GAGCTTCTGA GAATAAAAGA TCTTCTCAAC
AGAATTCTGA GTAAACACAC GGGACAGCCG ATTGAAAAGA TAGAAAAAGA CACAGACAGA
GATTTCTTCA TGAGTGCAGA AGAAGCGAAA GAGTACGGGA TAGTCGATAA AGTCGTCAGC
ACAAGAGAGT AA
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| Protein sequence | MTVKEKKIID QYVPIVVEST GRYERAYDIF SRLLKDRIVF LGSPIDDYVA NLVIAQLLFL
EAEDPDKDVY LYINSPGGSV TAGLAIYDTM QYIKCDVSTI CVGQAASMAA VLLAAGAKGK
RYALPNARIM IHQPLGGAEG PAKDVEIITR ELLRIKDLLN RILSKHTGQP IEKIEKDTDR
DFFMSAEEAK EYGIVDKVVS TRE
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