Gene Tpet_0234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0234 
Symbol 
ID5171748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp227491 
End bp228144 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content48% 
IMG OID640562737 
Producthypothetical protein 
Protein accessionYP_001243839 
Protein GI148269379 
COG category[S] Function unknown 
COG ID[COG2930] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACGAT TCCTCGTTGC TTTAACGATC CTCACATCTT CGCTGTTTTC TTTCGCAAGT 
GCGCTTGATA TAATCGATGA ATCTTTCCTC GCGCTGAAAG AGTTTCTCGA TCAACCTGAT
AGTGGTGCGT TTCTCTCACT TCTCGAGAGG GCCAGGGGCA TATTCATCGT GCCCAAATAC
CTGAAACTCG GCTGGGTACT GGGGGGACAG TACGGCCAGG GAGTGCTTTT GAAAAGAGAC
CCAGAGACGA ACACCTGGTA CGGCCCTCTG TTTGTGAAAA TGTACGGATT GAGCTTCGGT
CCGCAGATAG GATTTCAATC AGTTTCTCTC ATAGCCGTCA TCATGGAAAA TGTCGATGCC
TTCGCCGAAG GAAACATCAC CCTGGGAGGA TCACTGAGCG TCGCGGCGGG ACCCCTTGGA
AGAAGACTCA GCGCCGATTA CAATCTTGAC GCTTCCGTCT ATTCGTATTC AATAGCACGT
GGGTTCTACG CGGGTTTTTC CTTAGAAGGG GCAAAGATAG ACGTCGACTT AGATCTCACA
AGGGAGTACT ACAACGTGTA CAGAATCGAA CCTGAAGAAA TACTGAGAAG AGAAGTCTCG
GGAAGGGCAG AAAAGATCGT AAACCTTCTG AACGAAAAAT TGACAGAAGA ATAG
 
Protein sequence
MKRFLVALTI LTSSLFSFAS ALDIIDESFL ALKEFLDQPD SGAFLSLLER ARGIFIVPKY 
LKLGWVLGGQ YGQGVLLKRD PETNTWYGPL FVKMYGLSFG PQIGFQSVSL IAVIMENVDA
FAEGNITLGG SLSVAAGPLG RRLSADYNLD ASVYSYSIAR GFYAGFSLEG AKIDVDLDLT
REYYNVYRIE PEEILRREVS GRAEKIVNLL NEKLTEE