Gene Tpet_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0220 
Symbol 
ID5171490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp215346 
End bp215777 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID640562723 
ProductMarR family transcriptional regulator 
Protein accessionYP_001243825 
Protein GI148269365 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAAC CTTTTGAAAG AATTCTCAGA GAGATCTGTT TCATGGTGAA GGTGGAAGGC 
AGAAAGGTGT TGAGAGACTT CGGCATAACA CCGGCTCAGT TCGACATTCT TCAGAAGATC
TATTTCGAAG GTCCCAAACG TCCAGGAGAA CTCAGTGTTC TGCTGGGAGT TGCGAAGAGC
ACGGTGACCG GTCTGGTGAA AAGACTCGAG GCGGATGGTT ATCTGACGCG CACTCCAGAC
CCCGCGGACC GGAGAGCCTA CTTTCTGGTT ATAACGAGAA AAGGAGAGGA GGTCATAGAA
AAGGTCATCG AACGAAGGGA GAATTTCATC GAGAAGATCA CAAGCGATCT TGGTAAAGAA
AAATCCTCAA AGATACTCGA CTATCTGAAG GAGTTGAAGG GCGTTATGGA GAGAAATTTT
TCCAAACAAT AA
 
Protein sequence
MKQPFERILR EICFMVKVEG RKVLRDFGIT PAQFDILQKI YFEGPKRPGE LSVLLGVAKS 
TVTGLVKRLE ADGYLTRTPD PADRRAYFLV ITRKGEEVIE KVIERRENFI EKITSDLGKE
KSSKILDYLK ELKGVMERNF SKQ