Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0218 |
Symbol | |
ID | 5171764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 213310 |
End bp | 214068 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640562721 |
Product | patatin |
Protein accession | YP_001243823 |
Protein GI | 148269363 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAAAGG GAATAGCGTT CGCGGCGGGA GGAGTCAAAG GGGCGGCTCA CGTTGCTTTC CTGGAGAAAT CTGGAGACGT GTTCGATGTG ATCACCGGAT CATCGATAGG AGCCGTTGTA GGTGGTCTGT ACGCGCTCTA CGGAGAGCCC GCTTTGGTGA AAGACATCAC CTTTTCCCTT ATGAAGAAAC ACTTCGAAGA CCTGAAGAAG ACGGAATCGG AGAACACCTG GAGAGGATTG TTTCAGCGCT CTCTTTTCAA GGCGGACCTG CTGTTTTCTG TTCTCAAAGA GGCTTTTGGT AGAAAGAAAT TTTCTGACTG CAAGAAGACG CTCGGTGTTG TGGTCTTCGA TACAGAAAAC ATGGATTCTC TCCTTGTGAC AGAAGGATTT CTGATAGATG CCGTCGTAGC GAGCAGTTCT GTGCCGGGAT ATTTCGAGCC GATCTGGATA GGAGGGACTC CCTGTCTGGA TGGTGGGGTT CTTGCACCCA CACCGGTTTC TCAGGCGCGG GAACTCGGAG CAGACTTCGT CGTAGCTTCC GCTTTCAACA GAGAGAGAAA AGACGGATTT AAGAATCATT TCGAGATGTT CTTTGTGATG GACAGGTGGA AGGAGATTCT CCTGGAAAGA GAAGAACTTT CAAAGGCGAA TTTTGTGGTG ATGCACGATG TGAACGAGCC CTGGAACGCC TTTGATAAGT ACGAAGAAAT CTATAGAAAG GTACTTAAAA ATCTAAGGGG AGTGATTTTA CCCTGGTAA
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Protein sequence | MTKGIAFAAG GVKGAAHVAF LEKSGDVFDV ITGSSIGAVV GGLYALYGEP ALVKDITFSL MKKHFEDLKK TESENTWRGL FQRSLFKADL LFSVLKEAFG RKKFSDCKKT LGVVVFDTEN MDSLLVTEGF LIDAVVASSS VPGYFEPIWI GGTPCLDGGV LAPTPVSQAR ELGADFVVAS AFNRERKDGF KNHFEMFFVM DRWKEILLER EELSKANFVV MHDVNEPWNA FDKYEEIYRK VLKNLRGVIL PW
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