Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0215 |
Symbol | |
ID | 5171201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 209364 |
End bp | 211955 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640562718 |
Product | CBS domain-containing protein |
Protein accession | YP_001243820 |
Protein GI | 148269360 |
COG category | [J] Translation, ribosomal structure and biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGGGTCA TCACCACACA CAGGTCACCC GATTTCGATG CCTTCGCTTC CTGTGTCGCG GCGAAGAAGC TGTTTGATGA CCACATCATA GTTCTGCCTT CCAATCCGGC GAGGAATCTC TCCGATTTCC TCAAAGTCTA TTTGGATCGG TTTGAATTCA TCTGGGATCA CGAGTTTGAA GGCGAGGTCA CAGAACTCGT GATCGTCGAC ACACCTTCTC CGGATCGGAT TCCAGAGAAT ATCAGAGAAA AAAGTCAAGG AGCGAAGATA ACAGTTTACG ATCACCATGT GGATGAAAGT CCATACGATG GAATAGTATC GAAGGTGGGA GCCACGATAA CGATACTCGT TGAGCTCATT CGAGATAAAA ATATACCACT GGATCCCACC GAAACCACTC TCTTCATGAT CGCTCTCTAC GACGACACGG GAAATCTACT CTTTTCTTCA ACCACACCGC GGGATCTGGA GATAGCGAAG TTTCTTCTGG AAAACGGTGC AAATCTCGAT GAAGTGGCAC TTTACACAAG AGAAGAGCTC ACTCCTAAGC AGATGGAACT GCTGGACGAA CTGATAGAGA ACGCTCGTGA TTATGAAGTG AACGGTGTTC CGATAACCAT TTCAGTGATG GAGTGCGAGG ACTTTGTGGG AGGATTGGGG CTGATTGTGA GTAAGGTCTG GGAGATGCTG GGAAAGGAAA CCTTCATAGC GATTGTGAAG ATGGGAAAGA AGATCTACGT TATTGGAAGA ACCGGTTCAC CCGACGTGGA TCTCGGCTCT TTCATGAAAG ACCTCGGAGG AGGCGGGCAC ATGAGGGCAG CCTCCGCAAC TATCACCGGA AAAGAGATCG ACGAGGTTCT GAAAGAGGTT TTGAATAAAC TCCACGATCA TGTGGTTCCT CTCCTTCGCG CAAGAGATAT CATGTCCTCT CCCGTGAAGG TGGTCCTCTC TGACATGACG ATAGGAGAAG TGGATAGATT GATGAAGCAA ACCGGACACA GTGGATTTCC AGTTGTTGAG GGGAACAGGC TGGTAGGTAT TGTTACGAAG AAAGCAGTTG AGAAGGCGAT GAACCATGGT CTGGGTGACA GGCCTGTGAA GTCCATCATG TCGACGAACC TGGTGGTGGC GACTCCTGAT ACTCCTGTGA CCAGGTTGAG AGAACTCATG GTGGAACACG CCATCGGACG AATTCCTATA CTGGAGAACG GCATTCTCGT GGGCATCGTA ACAAGAAGTG ACGTTCTGAG GGCGATATTC GGGAAACCCT TCAAAAAATA CGTGATGCCG GTGTTTCAGG CGAACGGACA GATATTCAGA GATGTTTCAA AGCTCCTCGT AGAACGGGTA GATCCGAAGA TCTTGAATCT TTTCAGACTT CTCGGGAAAT TCGGCGACGA GGTGAACATG CCCGTTTATG TCGTGGGGGG CTTCGTTCGT GATCTTCTCC TCGGCATAGA GAATCTCGAT ATAGACATCG TTGTTGAAGG CAACGCGCTG GAATTCGCCG AGTACGCCAA ACGTTTTCTG CCGGGAAAAC TAGTGAAACA CGATAAATTC ATGACCGCTT CTCTTTTTTT GAAGGGAGGT CTCAGAATAG ACATCGCAAC GGCGAGGTTG GAGTACTACG AATCACCCGC CAAGCTCCCC GATGTGGAGA TGAGTACGAT AAAGAAGGAT CTCTACAGGA GAGATTTCAC GATAAACGCG ATGGCTATAA AGCTTAACTC GAAAGATTTC GGACTGCTGA TCGATTTCTT TGGGGGATAC AGGGATCTGA AAGAAGGAGT AATACGGGTC CTTCACACCC TGAGTTTTGT AGACGATCCC ACAAGGATTC TGCGTGCCGT TCGTTTTGAA CAACGTTTTG ACTTCAGAAT CGAAGAGACA ACAGAGAGGC TCCTGAAACA GGCTGTTGAA GAAGGATACC TTGAGCGAAC AACTGGTCCA CGCCTCAGAC AGGAATTGGA GAAAATACTC GAAGAGAAAA ACCCTCTGAA GTCAATCAGG AGGATGGCGC AATTCGATGT GATAAAACAT CTGTTCCCAA AAACCTATTA CACCCCTTCC ATGGACGGAA AGATGGAAAA TCTCTTCAGA AACATTCCGT GGGTGGAGGA GAACTTCGGA GAAGTTGACA AATTCTACGC AGCGCTCCAC GTGTTTCTCG AGTTCTACGA CGATGAGAGC TGGAAAGAAG TGAGAGATAG ATATTCTCTT CGCCGAAACC TGATAAACGA AATCAGACAC GTGGAAAAGA GTGCACCCGC TCTTCTGGAG ATGCTTTCGG AAAGGGTTCC TGTTTCTTTT GTTTATCCTC TTGTGAAGGG AGTCTCGAGC GAGACGATCT GTCACTTCCT GGCGTATCTC AGCGGTGAGA AAGAAGAGTT GTTCAAATCC TATCTTCTGA AGATAAAGAA CACGAAGCTC GAAAAGATAA ACGGGGAGTA TCTCATCAGA AAAGGGATAA CATCCGGTAA AATAATTGGA GAGGTTCTCG AGAAGATTCT CATGAGAAAA CTCGATGGAG ATACAAGAGA TGAAGAGGAG ATACTGAAGG AAGTCCTGGC ATCATTAGAA ACGGAGGGAT AA
|
Protein sequence | MRVITTHRSP DFDAFASCVA AKKLFDDHII VLPSNPARNL SDFLKVYLDR FEFIWDHEFE GEVTELVIVD TPSPDRIPEN IREKSQGAKI TVYDHHVDES PYDGIVSKVG ATITILVELI RDKNIPLDPT ETTLFMIALY DDTGNLLFSS TTPRDLEIAK FLLENGANLD EVALYTREEL TPKQMELLDE LIENARDYEV NGVPITISVM ECEDFVGGLG LIVSKVWEML GKETFIAIVK MGKKIYVIGR TGSPDVDLGS FMKDLGGGGH MRAASATITG KEIDEVLKEV LNKLHDHVVP LLRARDIMSS PVKVVLSDMT IGEVDRLMKQ TGHSGFPVVE GNRLVGIVTK KAVEKAMNHG LGDRPVKSIM STNLVVATPD TPVTRLRELM VEHAIGRIPI LENGILVGIV TRSDVLRAIF GKPFKKYVMP VFQANGQIFR DVSKLLVERV DPKILNLFRL LGKFGDEVNM PVYVVGGFVR DLLLGIENLD IDIVVEGNAL EFAEYAKRFL PGKLVKHDKF MTASLFLKGG LRIDIATARL EYYESPAKLP DVEMSTIKKD LYRRDFTINA MAIKLNSKDF GLLIDFFGGY RDLKEGVIRV LHTLSFVDDP TRILRAVRFE QRFDFRIEET TERLLKQAVE EGYLERTTGP RLRQELEKIL EEKNPLKSIR RMAQFDVIKH LFPKTYYTPS MDGKMENLFR NIPWVEENFG EVDKFYAALH VFLEFYDDES WKEVRDRYSL RRNLINEIRH VEKSAPALLE MLSERVPVSF VYPLVKGVSS ETICHFLAYL SGEKEELFKS YLLKIKNTKL EKINGEYLIR KGITSGKIIG EVLEKILMRK LDGDTRDEEE ILKEVLASLE TEG
|
| |