Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0203 |
Symbol | |
ID | 5171609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 197488 |
End bp | 198876 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640562706 |
Product | peptidase U62, modulator of DNA gyrase |
Protein accession | YP_001243808 |
Protein GI | 148269348 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00203968 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCAACG AAAGTGTTAT CAGAGACGTT ATCGCAGCTG TTTTGAAGAA CGGAGGGGAC TTTGCTGAGT TGTTCTTTGA GAAAAAGTAC GAGAATCGAT ACGAGCTGAA AGATGGGAAA ATCGAGCAGG CAACGAGTAG CGAGATCGTT GGAGTGGGGA TAAGAGGTTT TCTCGGAACA AAAGCCGTTT ATGCCTACAC GAACGATCTT TCAAGGGAGA ACCTGATAAA CGTTGCAAAG AAGGTGGGAG AAGCGCTCGA GGAGACAAAA ATCGAAGATC TCACATTCAA TTTCAACAGA ACGAAAAGGA AGGAAAGACA CGTGGTACTC ATTCCACCGG TTCAGGTGGA AAAAACGGAC AAGGTATCTG TTATGAAAAA AGCCTACTAC GCGGCGAAAG ATTACTCCGA ACTCATAAAA CAGGTGGTGG TCTGGTACTG GGATTACGAT CAGGAGATTC TGGTTGCAAA TTCAGAAGGA ACTTGGGCTG AAGACAGACG TGTGAGGACC CGTTTGATGA TAAACGCGGT AGCGGAAAAG GACGGAGTGC TCGAAAGGGG TTTCTACGGC CCCGGGGCAG GAATGGGTTT TGAATTCTTC GACAGAATAG ATGTGGAAGA AGCGGCGAAG AAAGCAGCGA GGATAGCAGC GAGGATGGTT GAGGCAGAGC CCGCTCCGGC TGGAAAGATG ACGGTTGTGA TTGCCAACGG TTTCGGAGGA GTCATTTTCC ACGAAGCAGT TGGACATGGC CTCGAAGCAA CGTCTGTGGC GAAGGGGGCT TCTGTTTTTG CGGGAAAGCT CGGGCAGAAA GTGGCTGCGG AATGTGTTTC CGCGGTGGAC GACGCCACCA TTCCGAACGG CTGGGGTTCC GCTAACGTGG ACGACGAAGG AACTCCCACA CAGAGAACAC TGCTCATAGA CAAGGGGGTT CTCGTTGGCT ACCTTGTGGA CAAGCTCGGT GCGAGAAGAA TGGGGATGAA GAGCACAGGA AGCGGCAGAA GACAGGACTA CACCTTCCCA CCCACTTCGA GGATGAGCAA CACCTTCATA CTCCCTGGAG ATTACCACCC GGAAGAAATC ATCGCGGCTA CCGAGTACGG TCTCTACGCG AAGACCATGG GAGGTGGATC GGTTAATCCG GCCACTGGAG AGTTCAACTT CGCGGTTTCC GAAGCGTATC TCATAGAAAA AGGAAGGGTC ACGAAACCGG TGAGGGGCGC CACACTGATA GGTAAGGGAC ACGAGATCAT TCAGAAGATC GACATGGTGG GAAACGATTT GGCGAGAGAC CAGGGTATGT GCGGTTCGTT CTCTGGATCC GTTCCGGCAG ATGTGGGCCA GCCCACGATA AGAGTTAAGG AGATCGTAGT AGGGGGGCGA AACAAATGA
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Protein sequence | MLNESVIRDV IAAVLKNGGD FAELFFEKKY ENRYELKDGK IEQATSSEIV GVGIRGFLGT KAVYAYTNDL SRENLINVAK KVGEALEETK IEDLTFNFNR TKRKERHVVL IPPVQVEKTD KVSVMKKAYY AAKDYSELIK QVVVWYWDYD QEILVANSEG TWAEDRRVRT RLMINAVAEK DGVLERGFYG PGAGMGFEFF DRIDVEEAAK KAARIAARMV EAEPAPAGKM TVVIANGFGG VIFHEAVGHG LEATSVAKGA SVFAGKLGQK VAAECVSAVD DATIPNGWGS ANVDDEGTPT QRTLLIDKGV LVGYLVDKLG ARRMGMKSTG SGRRQDYTFP PTSRMSNTFI LPGDYHPEEI IAATEYGLYA KTMGGGSVNP ATGEFNFAVS EAYLIEKGRV TKPVRGATLI GKGHEIIQKI DMVGNDLARD QGMCGSFSGS VPADVGQPTI RVKEIVVGGR NK
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