Gene Tpet_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0192 
Symbol 
ID5170030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp185964 
End bp187136 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content43% 
IMG OID640562694 
Producthypothetical protein 
Protein accessionYP_001243797 
Protein GI148269337 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCATCA GCGATCTTCA CATAGGAGAT GGTTCAGCGA AAGACGATTT TTTCTTCGAT 
AAAGAGCTTG TGAATTTCAT CGAAGACATA TCTCAAACTG AAGACGTTGA ACTCTTCATC
GTTGGCGATG GATTTGAAAT ACTCGAAAGT CACGCGGTGA GGGAAATTGG ACTCGTCTCT
TTCGATGAGG TTGTGGAAAA ACTCGATGAG ACGGTGATCG ACGAAATCGA GAAAAAGCAC
TCTGAAGTCT TCGAGACTCT CAAGAAGTTT TCCAGACGAC ACAACGTGTA TTACGTGGTG
GGAAATCACG ACTATCATAT TCTCAAAAAC AAAAAACTCC AGAATACCTT GAAGAATCGC
TTTGAAAAGT TCGAGATACT TCCATACTAC TACGATCCTC ACAGTAAACT CCTCGTTCTC
CACGGAAACC AGTTCGATGT TATAAACCGT TTCACCGTGG ACAGGAAAAC CAAAAAGGTA
ATACCACCTC TTGGAGACTA CATAGCCAGA TACATGATGA TAAATTTCGA CAGTCAGGTG
GTTAACTTCG CTCCTGAGGA CATCATTCGA GATTACGACA ACGTGAGGCC TTTGCTCGAC
GTTTTTCACT GGTTCGACTA CGTGACGGAA ATCTACGATC TCAGTGTCGA TCTGGTTGAA
CTCTGGCTGA AGAGTTTTCT CAGTATGTTG AAGACGAAAG AAGCCAAAAA ATGGATGAAG
AACAATTTCC CAAGAACACA CTGGCTTTCC AAGGTGTTTG TGAACAGGTT CGGTGGTATG
GAGCTGGGTA AGGTACTCGT AAGGAGTATA TACACACTCA GAAAGTTGAG AAGAGTTGAC
TACCTTCAGA AATGGGCAAA ATCTATATTG AAAGGAAGCC ATCGCTGGAA AAGGTTCATG
ACGGGTTACC CCGGAGATTT ACATGAAGTA GAGGAAATTG ATATACTTGT GATGGGACAC
GTTCATCATT TCGCTTACCG AATAGTTCCA ACGCCTCAGG GTAAAAAGCT GTACGTGAAC
TGTGGTAGCT GGAGGCCCGT TCTCGAGAAG ATCGGTATCA GAAAGAAGCA CGGTTTCCAC
CGAAAAGCGG AGCTTCCAAA GATCGTAATG GATTTCTCAG GGAAAAACGT TGAAGTGAAG
GCATCTATCA TGAATGTTCT CGGGAAAATT TAG
 
Protein sequence
MFISDLHIGD GSAKDDFFFD KELVNFIEDI SQTEDVELFI VGDGFEILES HAVREIGLVS 
FDEVVEKLDE TVIDEIEKKH SEVFETLKKF SRRHNVYYVV GNHDYHILKN KKLQNTLKNR
FEKFEILPYY YDPHSKLLVL HGNQFDVINR FTVDRKTKKV IPPLGDYIAR YMMINFDSQV
VNFAPEDIIR DYDNVRPLLD VFHWFDYVTE IYDLSVDLVE LWLKSFLSML KTKEAKKWMK
NNFPRTHWLS KVFVNRFGGM ELGKVLVRSI YTLRKLRRVD YLQKWAKSIL KGSHRWKRFM
TGYPGDLHEV EEIDILVMGH VHHFAYRIVP TPQGKKLYVN CGSWRPVLEK IGIRKKHGFH
RKAELPKIVM DFSGKNVEVK ASIMNVLGKI