Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0166 |
Symbol | rpsB |
ID | 5170502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | - |
Start bp | 157903 |
End bp | 158685 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640562667 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001243771 |
Protein GI | 148269311 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000940316 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGTTG TTACGATGAA ACAGCTTCTG GAAGCGGGAG TTCACTTTGG ACACAGAACG AGAAGATGGA ACCCGAAGAT GGCTCCCTAC ATCTACACGG AAAGGAAAGG CATCTACATC ATCGACCTTC AGAAGACCCA GCAGTTGCTC GAAGAGGCTT ACTACTTCGT AAGGGAGAAA GCCAGCGAAG GTGCAACGAT TCTCTTTGTT GGGACGAAAA AGCAGGCCCA GGGAGTCATA AAGGCTGAGG CAGAAAGGTG TGGAGCCTTC TACGTGAACA ACAGATGGCT TGGAGGACTT TTGACGAACT TCAAAACGAT CAGATCGAGG ATAGAAAAAC TCATCGAACT CGAAGAAATG GAGCAGAGCG GCAAGCTCGA CGAACTTCCA AAGAAAGAAC AGAGCAGGAT CAGAAGAATT CTCGAAAAAC TCAGAAAGAA CCTTGGCGGT CTCAAAGAGA TGAGAAAGAT TCCAGACATC ATCTACATCG TTGATCCAAG GAAAGAAAGA ATCGCTGTGG CAGAGGCGAA CAAGCTGGGA ATCCCCATCG TGGCTATTGT TGACACGAAC TGCGACCCCG ATCCCATTGA CTACGTTATC CCTGGAAACG ACGATGCGAT CAGATCCATA AAGCTCATCA CTTCCGTCAT TGCAAATGCG TATCTCGAGG GAAGAGAGGG AGCTCCTCTC ACCACGGAAG AAGTGGAAAG TTCGGAAGAA ATGATCGAAG AAATGACAGA GGACTTTAAT CTGGAAGAAT TCGAAGAGGA AGAAGAAGTG TGA
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Protein sequence | MAVVTMKQLL EAGVHFGHRT RRWNPKMAPY IYTERKGIYI IDLQKTQQLL EEAYYFVREK ASEGATILFV GTKKQAQGVI KAEAERCGAF YVNNRWLGGL LTNFKTIRSR IEKLIELEEM EQSGKLDELP KKEQSRIRRI LEKLRKNLGG LKEMRKIPDI IYIVDPRKER IAVAEANKLG IPIVAIVDTN CDPDPIDYVI PGNDDAIRSI KLITSVIANA YLEGREGAPL TTEEVESSEE MIEEMTEDFN LEEFEEEEEV
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