| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0165 |
|---|
| Symbol | |
|---|
| ID | 5170541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 157561 |
|---|
| End bp | 157881 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640562666 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001243770 |
|---|
| Protein GI | 148269310 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0393] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000515735 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATCA CCACCACGGA ACAGGTGCCT GGATACAGGG TGAAAGAGAT CCTCGGTGTA
GTCTGCGGAA ACGTGGTGAT GTCGAAGCAC CTGGGAAAAG ACATAGCCGC CGCTTTTAAA
ACCCTCGCGG GTGGCGAAAT CAAGGGCTAC ACGGAGATGC TCACGGAGGC AAGAAACATC
GCACTGGAAA GGATGATAAA AGAAGCGGAG AAACTCGGAG CAGATGCGGT GATAGGATTT
AGATATTCTT CGTCCACGAT TATGAGCGGT GCTGCGGAGA TACTTGCGTA CGGAACCGCA
GTGAAACTGG AAAAAATTTA A
|
|---|
| Protein sequence | MIITTTEQVP GYRVKEILGV VCGNVVMSKH LGKDIAAAFK TLAGGEIKGY TEMLTEARNI
ALERMIKEAE KLGADAVIGF RYSSSTIMSG AAEILAYGTA VKLEKI
|
|---|
| |