| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0162 |
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| Symbol | |
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| ID | 5170864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 155651 |
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| End bp | 156016 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640562663 |
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| Product | regulatory protein GntR, HTH |
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| Protein accession | YP_001243767 |
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| Protein GI | 148269307 |
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| COG category | [K] Transcription |
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| COG ID | [COG1725] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000379114 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTGGTTCA AGATCGACTT TCACTCCTCA AAACCCATCT ATGAACAAAT AAAGGAAAAG
ATAAAACTTC TGATCCTGTC GGGAAAACTG AAAGAGGGTG AATTTGTGCC CTCCATAAGA
TATCTTGCGG AAGACCTCGG TGTGAACCTG AACACCGTCG CCCGCGCTTA CAGAGAGCTC
GTCCGGGAAG GAGTTTTAGA AGTGAGAAGA GGAGAGGGCT ACGTCGTCTC AAAAGTAAAC
TTGGAAAAGA TCCGAACACA GCTTGAAACA GAACTCAAGA AGAAGATCGA AGACTGCAAG
AAAGCGGGTA TTCCACTGGA GAGGATTCTG AAAATAACAG AAGAAATCTA CAGAGGTGAT
GAATGA
|
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| Protein sequence | MWFKIDFHSS KPIYEQIKEK IKLLILSGKL KEGEFVPSIR YLAEDLGVNL NTVARAYREL
VREGVLEVRR GEGYVVSKVN LEKIRTQLET ELKKKIEDCK KAGIPLERIL KITEEIYRGD
E
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