| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0157 |
|---|
| Symbol | |
|---|
| ID | 5171782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 148657 |
|---|
| End bp | 149595 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640562658 |
|---|
| Product | DNA polymerase III gamma/tau subunits-like protein |
|---|
| Protein accession | YP_001243762 |
|---|
| Protein GI | 148269302 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0035594 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATT TGATCAGAAA GTACGCTAAA GATCAACTGG AAATTTTGAA AAGGATCATA
GAAAAGTCTG AAGGAATATC CATTCTCATA AACGGAGAAG ATCTCTCGTA TCCGAGAGAA
GTATCCCTTG AACTTCCCGA GTACGTGGAG AAATTTCCCC CGAAGGCCTC GGATGTTCTG
GAGGTAGATC CCGAGGAGGA GAACATAGGT ATAGACGAAA TCAGAACGAT AAAGGACTTC
CTGAACTACA GCCCTGAACT CTACACGAGA AAGTACGTGA TAGTCCACGA CTGTGAAAGA
ATGACCCAGC AGGCGGCGAA CGCGTTCTTG AAAACCCTTG AAGAACCGCC AGAATACGCT
GTGATCGTTC TGAACACCCG CCACTGGCAT TATCTACTGC CGACGATAAA GAGCCGAGTG
TTCAGAGTGG TTGTGAACGT TCCAAAGGAG TTCAGAGATC TCGTGAAAGA GAAAATAGGC
GATTTCTGGG AGGAACTTCC GCTCCTTGAG AGAGACTTCA AAACGGCTTT CGAAGCCTAC
AAACTTGGTG CGGAAAAACT TTCTGGATTG ATGGAAAGTC TCAAAGTTTT GGAGACGGAA
AAACTCTTAA AGAAAGCCCT TTCAGAAGGA CTCGAGGGTT ATCTCGCGTG TAGGGAGCTT
CTGGAGAGAT TTTCAAAGGT GGAATCGAAG GAATTCTTTG CGCTTTTTGA CCAATTAACC
AACACGATAA CGGGAAAAGA CTCATTTCTT TTGATCCAGA GACTGACAAG AATTGTCCTT
CACGAAAACA CCTGGGAAAG CGTTGAAGAT CAAAAAAGCG TGTCTTTCCT CGATTCAATT
CTCAGGGTGA AAATAGCGAA TCTGAACAAC AAACTCACTC TGATGAATAT TCTCGCGATA
CACAGAGAGA GAAAGAGAGG TGTCAACGCT TGGAGCTGA
|
|---|
| Protein sequence | MNDLIRKYAK DQLEILKRII EKSEGISILI NGEDLSYPRE VSLELPEYVE KFPPKASDVL
EVDPEEENIG IDEIRTIKDF LNYSPELYTR KYVIVHDCER MTQQAANAFL KTLEEPPEYA
VIVLNTRHWH YLLPTIKSRV FRVVVNVPKE FRDLVKEKIG DFWEELPLLE RDFKTAFEAY
KLGAEKLSGL MESLKVLETE KLLKKALSEG LEGYLACREL LERFSKVESK EFFALFDQLT
NTITGKDSFL LIQRLTRIVL HENTWESVED QKSVSFLDSI LRVKIANLNN KLTLMNILAI
HRERKRGVNA WS
|
|---|
| |