Gene Tpet_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0154 
Symbol 
ID5171765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp147307 
End bp147621 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content44% 
IMG OID640562655 
Productribosomal protein L7Ae/L30e/S12e/Gadd45 
Protein accessionYP_001243759 
Protein GI148269299 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1358] Ribosomal protein HS6-type (S12/L30/L7a) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000931846 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGACC AGATCAGAAG AAAGGTTTAC AGTTACATAG GTTTCGCTGT TAGAGCCAGA 
AAGATCGTCT TTGGTAAGGA ACGAATAAGG GCTTACATAA GGTCACCGAG GGAAAAAAAG
CTCATAATCA TAGCGGAAGA TACCAGTGAA AGGATGAAGA GGGACACGAT CATGAGGTGC
GAGAACAAGA AAGTCCCTTA TGTTATCATG TTCAGCAAAG AGGAACTGGG AAGGTTGCTC
GACAAACCCG CTGTTTCGGT GATAGGTCTT GAAGAGGACA ATCTGATAGA TGCCATTTTG
GGGATGGTAA AATAG
 
Protein sequence
MEDQIRRKVY SYIGFAVRAR KIVFGKERIR AYIRSPREKK LIIIAEDTSE RMKRDTIMRC 
ENKKVPYVIM FSKEELGRLL DKPAVSVIGL EEDNLIDAIL GMVK