| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0144 |
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| Symbol | |
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| ID | 5171628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 138776 |
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| End bp | 139573 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640562645 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_001243749 |
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| Protein GI | 148269289 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTC TGAAAAGATC CTTTGCTCCT CTGACAGAAA AACAGTGGCA GGAGATAGAC
AACAGAGCAA GAGAGATCTT CAAAACACAG CTCTACGGAA GGAAATTCGT CGATGTGGAA
GGTCCCTACG GCTGGGAGTA CGCTGCCCAT CCACTCGGGG AAGTTGAGGT GCTTTCAGAC
GAGAACGAAG TGGTGAAGTG GGGATTGAGG AAGTCTCTGC CGCTCATCGA ACTGAGGGCA
ACGTTCACTC TCGATCTGTG GGAACTCGAC AACCTCGAGA GAGGAAAACC GAACGTGGAT
CTTTCCAGCT TAGAAGAAAC GGTGAGAAAG GTTGCGGAAT TTGAAGACGA AGTGATATTC
AGAGGATGTG AAAAATCGGG TGTTAAAGGC CTTCTTTCCT TCGAAGAGAG GAAAATCGAA
TGTGGAAGCA CACCGAAAGA CCTCCTCGAA GCCATAGTGA GGGCTCTTTC GATCTTCTCA
AAAGATGGTA TAGAGGGCCC TTACACACTC GTCATAAACA CGGACAGATG GGTCAGCTTC
CTGAAGGAAG AGGCAGGGCA TTACCCCCTC GAGAAGAGAG TGGAAGAATG CCTCAGGGGT
GGCAAGATCA TAACCACACC GAGGATCGAG GATGCCCTCG TCGTTTCCGA ACGTGGAGGA
GATTTCAAAT TGATCCTCGG ACAGGATCTC TCGATAGGGT ACGAAGACAG AGAAAAAGAC
GCGGTGAGGC TTTTCATAAC GGAGACGTTC ACCTTCCAGG TTGTCAACCC GGAGGCTTTG
ATTCTTCTAA AGTTCTGA
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| Protein sequence | MEFLKRSFAP LTEKQWQEID NRAREIFKTQ LYGRKFVDVE GPYGWEYAAH PLGEVEVLSD
ENEVVKWGLR KSLPLIELRA TFTLDLWELD NLERGKPNVD LSSLEETVRK VAEFEDEVIF
RGCEKSGVKG LLSFEERKIE CGSTPKDLLE AIVRALSIFS KDGIEGPYTL VINTDRWVSF
LKEEAGHYPL EKRVEECLRG GKIITTPRIE DALVVSERGG DFKLILGQDL SIGYEDREKD
AVRLFITETF TFQVVNPEAL ILLKF
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