| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0128 |
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| Symbol | |
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| ID | 5171397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | + |
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| Start bp | 124822 |
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| End bp | 125766 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640562629 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001243733 |
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| Protein GI | 148269273 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR03151] putative enoyl-(acyl-carrier-protein) reductase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0565011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGA GAACAAGAGT GACAGATCTT CTGGAAATAG AGCATCCAAT CCTCATGGGT
GGAATGGCCT GGGCGGGAAC TCCCACCCTC GCAGCAGCGG TATCGGAAGC AGGAGGACTT
GGAATCATCG GATCCGGAGC CATGAAACCG GACGACCTGA GGAAAGCGAT CTCCGAGCTC
AAACAGAAGA CGGACAAACC TTTCGGTGTG AACATAATCC TCGTGTCTCC GTGGGCAGAC
GATCTCGTCA AGGTGTGCAT AGAAGAGAAA GTACCCGTCG TCACGTTCGG TGCGGGAAAC
CCAACGAAGT ACATAAGGGA ACTCAAGGAA AACGGAACAA AGGTGATACC CGTTGTCGCT
TCCGACTCTC TGGCAAAGAT GGTGGAAAGA GCGGGAGCGG ATGCGGTGAT AGCGGAAGGG
ATGGAGTCCG GTGGACACAT AGGTGAAGTC ACAACCTTCG TTCTCGTCAA CAAAGTCTCC
AGGAGTGTGA ACATCCCCGT GATCGCAGCG GGAGGCATCG CCGACGGAAG AGGTATGGCA
GCAGCCTTCG CACTCGGAGC GGAAGCCGTT CAGATGGGAA CCAGGTTTGT GGCGAGTGTA
GAAAGCGACG TGCACCCGGT TTACAAAGAA AAGATCGTCA AGGCCTCCAT AAGAGACACC
GTTGTGACGG GAGCCAAACT TGGACACCCC GCGCGCGTTC TCAGAACTCC CTTTGCGAGG
AAGATCCAGG AGATGGAGTT TGAAAACCCC ATGCAGGCTG AAGAAATGCT GGTGGGAAGT
CTCAGAAGAG CGGTTGTTGA AGGCGATCTG GAGAGAGGAT CCTTCATGGT AGGACAGAGC
GCCGGTTTGA TCGATGAGAT AAAACCGGTG AAGCAGATCA TAGAGGATAT CCTGAAGGAG
TTCAAAGAAA CGGTGGAGAA GCTGAGGGGG TACATTGGAG GATGA
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| Protein sequence | MTVRTRVTDL LEIEHPILMG GMAWAGTPTL AAAVSEAGGL GIIGSGAMKP DDLRKAISEL
KQKTDKPFGV NIILVSPWAD DLVKVCIEEK VPVVTFGAGN PTKYIRELKE NGTKVIPVVA
SDSLAKMVER AGADAVIAEG MESGGHIGEV TTFVLVNKVS RSVNIPVIAA GGIADGRGMA
AAFALGAEAV QMGTRFVASV ESDVHPVYKE KIVKASIRDT VVTGAKLGHP ARVLRTPFAR
KIQEMEFENP MQAEEMLVGS LRRAVVEGDL ERGSFMVGQS AGLIDEIKPV KQIIEDILKE
FKETVEKLRG YIGG
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