| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0116 |
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| Symbol | |
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| ID | 5171216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga petrophila RKU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009486 |
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| Strand | - |
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| Start bp | 110149 |
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| End bp | 110964 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640562617 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001243721 |
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| Protein GI | 148269261 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAGA TCAGAAAGAT CTTGACTTAT GTGGTCCTTG TTCTTTTTTC GATTCTTTCA
GTGTGGCCGT TTTACTGGAT TGCAAAGACC TCTTTCGAGG CAGGGGGCAA CGTGTACAAG
TATCCACCGA GTCTCATTCC GTACCCGGCA ACCTTTTCAA ACTACGTTGG GGCATGGAAA
ACGGTGAAGC TTGGAAATTA CTATCTGAAC ACGATTATAA TAGCGGGTTT TGGCACACTT
TTGAACGTGC TTTTCTCGCT GATGGTGGCC TATCCTCTCG CCAGAATAGA CTTCAAAGGG
AAACAGCTGG TGCTCTTTCT GATTCTTCTT CCAATGATGA TTCCAGTTCA GAACACCCTG
ATAGTCAACT ACCTCACCCT CAGAAAGCTC AGTCTTCTGA ACACCTACAC CGGGGTGATT
CTCCCCCAGG CTGTTACGAT CTTCGGTATA TTCATGATGA GACAGGCTTA TTTGAGTGTT
CCGAAGAGCT TCGAAGACGC TGCAAGGATA GATGGTGCCG GAGAACTCTA CATATGGTGG
AGGATAATCA CACCTCTGAT AAAACCAGAT ATTGCCACTC TCGTTGTGTT CCAGGTGATC
ACCTGGTGGG ACAATTTCCT GTGGCCTCTC ATAGTTCTGT CCGATTCCAA CAAGTATCCT
CTCTCTGTGG CACTCGTTTA TCTGAACAGC ACTTTTCAGG TGAATTTCAG ATACACCGCA
GCCGGAATCG TTCTGGCAAT ACTTCCTGTT GTGGTACTGT TCATCTTCGC TCAGAGGTAC
ATAATAAACG CTATTGCCGG TGGCGTGAAA TACTGA
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| Protein sequence | MPKIRKILTY VVLVLFSILS VWPFYWIAKT SFEAGGNVYK YPPSLIPYPA TFSNYVGAWK
TVKLGNYYLN TIIIAGFGTL LNVLFSLMVA YPLARIDFKG KQLVLFLILL PMMIPVQNTL
IVNYLTLRKL SLLNTYTGVI LPQAVTIFGI FMMRQAYLSV PKSFEDAARI DGAGELYIWW
RIITPLIKPD IATLVVFQVI TWWDNFLWPL IVLSDSNKYP LSVALVYLNS TFQVNFRYTA
AGIVLAILPV VVLFIFAQRY IINAIAGGVK Y
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