Gene Tpet_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_0114 
Symbol 
ID5171202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand- 
Start bp108038 
End bp109132 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content49% 
IMG OID640562615 
ProductN-acetylglucosamine-6-phosphate deacetylase 
Protein accessionYP_001243719 
Protein GI148269259 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1820] N-acetylglucosamine-6-phosphate deacetylase 
TIGRFAM ID[TIGR00221] N-acetylglucosamine-6-phosphate deacetylase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGTTG AGAAAGTTCT GATCGTTGAT CCCATCGATG GAGAGTTCAC CGGGGACGTG 
GAGATAGAAG AGGGAAAGAT CGTGAAAGTT GAGAAGAGAG AATGCATTCC ACGGGGTGTT 
CTCATGCCCG GGTTTGTTGA TCCGCACATC CACGGTGTGG TGGGTGCAGA CACCATGAAC 
TGCGACTTCT CTGAAATGGA AGAATTTCTC TACTCTCAGG GAGTCACCAC GTTCCTTGCC 
ACAACTGTTT CCACTTCGCT CGAAAAAATG AAAGAAATTC TGGAGAAGGC AAGAGAATAC 
ATCCTTGAAA ACCCGTCAAC ATCGCTGCTG GGCGTTCATC TGGAAGGACC GTACATCTCC 
AAAGAAAAGA AAGGGGCGCA CTCAGAAGGA CACATAAGAC CACCTTCAGA AGAAGAACTG 
AGGGAAATCG ATTCTCCGGT GAAGATGCTC ACCTTCGCAC CTGAGATAGA AAGCTCCGAA 
CTTCTTTTGA AACTTGTGGA AAGAGACATC GTTCTCTCTG CGGGACACTC CATTGCAACT 
TTTGAGGAGT TCATGAAATT CTACAAAGAG GGTGTCAAGA GAATCACACA TTTTCCGAAC 
GGATTGAAGC CTCTTCATCA CAGAGAGATA GGAATCACGG GGGCGGGACT TTTGTTGGAC 
GATGTGAAGC TGGAGCTCAT CTGCGACGGG GTGCATCTTT CTAAGGAGAT GGTGAAACTC 
GTCTACAAAG TGAAAAAAGC GGATGGAATC GTTCTGGTCA CAGATTCTAT ATCCGTGGCG 
GGTCTCAAAG ATGGAACGAC CACCCTGGGA GATCTCGTGG TGAAGGTGGA AGGCGGTGTT 
CCGAGGTTGG AAGATGGTAC ACTCGCGGGA AGCACGCTCC TTTTCTCGCA GGCCGTGAAG 
AACTTCAGAA AGTTCACGGG GTGTTCCCTT ACAGAACTTG CAAAAGTGTC CTCGTACAAC 
AGCTGTGTTG AACTGGGACT GGATGACAGA GGAAGAATAG CCGAAGGAAC GAGGGCGGAT 
CTTGTTCTCC TCGATGAAGA TTTGAACGTT GTGATGACGA TCAAAGAGGG TGAGGTAGTT 
TTTCGATCCA GATGA
 
Protein sequence
MIVEKVLIVD PIDGEFTGDV EIEEGKIVKV EKRECIPRGV LMPGFVDPHI HGVVGADTMN 
CDFSEMEEFL YSQGVTTFLA TTVSTSLEKM KEILEKAREY ILENPSTSLL GVHLEGPYIS 
KEKKGAHSEG HIRPPSEEEL REIDSPVKML TFAPEIESSE LLLKLVERDI VLSAGHSIAT 
FEEFMKFYKE GVKRITHFPN GLKPLHHREI GITGAGLLLD DVKLELICDG VHLSKEMVKL 
VYKVKKADGI VLVTDSISVA GLKDGTTTLG DLVVKVEGGV PRLEDGTLAG STLLFSQAVK 
NFRKFTGCSL TELAKVSSYN SCVELGLDDR GRIAEGTRAD LVLLDEDLNV VMTIKEGEVV 
FRSR