Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_0113 |
Symbol | |
ID | 5171182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 106638 |
End bp | 108032 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640562614 |
Product | MATE efflux family protein |
Protein accession | YP_001243718 |
Protein GI | 148269258 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATT CACTCTTGAA GAGTTACCTT CCAAAGGAAG AAGTACCAGG GATCAGAAAA GAACTCATAA AATTAGCACT CCCTGCCATG GGAGAAAACG TGCTCCAGAT GCTCTTTGGA ATGGCAGACA CCGCCTTTTT GGGACATTAC TCATGGAAAG CGATGAGCGG TGTGGGACTC TCCAACCAGG TATTCTGGGT GGTTCAGGTC GTTCTGATCG CCGCCAGTAT GGGAGCCACC GTCACGATAG CGAACGCCAT CGGAGCGGGC AACAGGAAAG CTGTGAGGTC CCTTGCCTGG AACAGTGTCT TTCTCGCCAT ATTCACGGGT GTTATTCTCA CCGCCCTCAC ACCGCTCTCC GATGTACTGA TAAACATCTT TCCGAATCTG GAAGGAGAAA TAGAATCATC CGCGAAGGAG TATCTGAAAG TCATCCTTTC CGGTTCCATG GGCTTTTCCA TCATGGCCGT GTTCTCTGCG ATACTCAGGG GTGCTGGTGA CACAAAAACG CCGATGATCG TCACTGGTCT CACGAACTTT CTGAACATCT TCCTCGATTA CGCCATGATC TTTGGAAAGT TCGGATTCCC GGAGATGGGG GTCAGAGGAG CAGCAGTTGC GACGATCCTC TCAAGATTTG TGGGAGCAGC GATCCTCACG TACGTGATAT TCAAAAGAGA GGAGTTCCAG CTCAGAAAAG GGTTTGTTCC TCCCAAGTGG TCCAGTCAAA AAGAAATTCT CCGTGTTGGA TTTCCAACTG CCATAGAGAA CTTCGTTTTT TCCACAGGTG TTTTGATGTT TGCGAACATC CTGCTCATCG CAGGAGCTGA AGCGTACGCT GGACACAGAA TAGGTATAAA CGTCGAGTCT CTATCTTTCA TGCCCGCGTT TGGAATCTCG GTCGCTATCA CCACACTGGT TGGAAGGTAC AACGGAATGG GAAACAAGGA ACACGTTCTT GGAGTCATTC GACAGGGATG GATCCTGAGT CTTCTGTTTC AGGTGACGGT TGGTATTATA ATCTTTCTTT TTCCAGAGCC ACTGATACGC ATCTTCACCA GTGATCCACA GATAATAGAG ATCTCAAAAC TCCCCGTCAA GATAATTGGA CTCTTCCAAT TTTTCCTCGC AATAGATTCA ACCATGAACG GTGCCCTCAG GGGGACGGGA AACACCCTTC CACCGATGAT CATCACCTTC ATCTCCATCT GGACCGTGAG GCTTCCCGTC GCCTTCGTGA TGGTGAAGTA CTTCCAGCTT GGGCTTCTCG GTGCCTGGAT CGGAATGATC GCAGACATCA TCTTTCGAAG TACACTGAAG CTCCTCTTCT TCCTCTCCGG CAAGTGGGAA AAGAGAGCCG TCCTCACACG GGAGAGAGTG AAAGAGTTGG GATAA
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Protein sequence | MKYSLLKSYL PKEEVPGIRK ELIKLALPAM GENVLQMLFG MADTAFLGHY SWKAMSGVGL SNQVFWVVQV VLIAASMGAT VTIANAIGAG NRKAVRSLAW NSVFLAIFTG VILTALTPLS DVLINIFPNL EGEIESSAKE YLKVILSGSM GFSIMAVFSA ILRGAGDTKT PMIVTGLTNF LNIFLDYAMI FGKFGFPEMG VRGAAVATIL SRFVGAAILT YVIFKREEFQ LRKGFVPPKW SSQKEILRVG FPTAIENFVF STGVLMFANI LLIAGAEAYA GHRIGINVES LSFMPAFGIS VAITTLVGRY NGMGNKEHVL GVIRQGWILS LLFQVTVGII IFLFPEPLIR IFTSDPQIIE ISKLPVKIIG LFQFFLAIDS TMNGALRGTG NTLPPMIITF ISIWTVRLPV AFVMVKYFQL GLLGAWIGMI ADIIFRSTLK LLFFLSGKWE KRAVLTRERV KELG
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