Gene Tpet_0112 details

Gene Information

• Locus tag: Tpet_0112
• ID: 5171177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermotoga petrophila RKU-1
• Kingdom: Bacteria
• Replicon accession: NC_009486
• Strand: +
• Start bp: 105725
• End bp: 106429
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 640562613
• Product: hypothetical protein
• Protein accession: YP_001243717
• Protein GI: 148269257

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.35811
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAA TTTTCTTGTC TCTTTCGATA GCCGCAATCC TGCTTTTCAC TATGGGAACC 
AGCTGTGAAT CGAGGGTTCA AGTACCTGTG CCTTTCCCGG AGGTGAAGGT GGAAACACCT 
AAGGTGGATC TTGGATTCAA AGTGGTGAAA CCAACCGGAA CAGAGGATTT CTTTGAAGAT 
TTCGAATCCT ATGGTCAGGG CCAGGTTGCT CCGTTCGGTC CCTGGAAAGT CTTGGAAGAA 
AGTCCTCACG TTGAAGAAGG AGTCCAACCT GATAAAACTA TCGGAAAGAT ATTGAGAGTG 
GAGGGAAATC AGGGAATCTT CACACCTGGG GAGTGGACAA ATTTTATCCT CGAGTGTAAC 
CTGAGGCTCA ACGGAATTCT TGCAGACGGG ATAGTTCTAT TCAGGTTATC CGATGATGCA 
AAAAAGGGGT TCTATGTTAA CATCAATCTC TTTGGTGCTT CACTGCACAA ATTTGCGGGG 
AGTATCGATA TGAAGATTGC TGAGAACACA AGTGTTAAAG CCAGTGAGGA CGTGTGGCAC 
TACCTAAAGT TGGTGGTCAA CGGACAGAAC ATAAAGGTGT ATCTGGATGG AAAGAAAATT 
ATAGATGTTC AAGATCCGGA TGTATTCCCT GGAGGAATTG GGTTTGCAAG AGCTGAGGAT 
ACAGCTTTCT ACGACAATGT AAGGGTTGAA ACTCTCATTG AATAA 

 

Protein sequence

MKKIFLSLSI AAILLFTMGT SCESRVQVPV PFPEVKVETP KVDLGFKVVK PTGTEDFFED 
FESYGQGQVA PFGPWKVLEE SPHVEEGVQP DKTIGKILRV EGNQGIFTPG EWTNFILECN 
LRLNGILADG IVLFRLSDDA KKGFYVNINL FGASLHKFAG SIDMKIAENT SVKASEDVWH 
YLKLVVNGQN IKVYLDGKKI IDVQDPDVFP GGIGFARAED TAFYDNVRVE TLIE