| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_0099 |
|---|
| Symbol | |
|---|
| ID | 5170588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | - |
|---|
| Start bp | 91086 |
|---|
| End bp | 92045 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640562598 |
|---|
| Product | ribokinase-like domain-containing protein |
|---|
| Protein accession | YP_001243704 |
|---|
| Protein GI | 148269244 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) |
|---|
| TIGRFAM ID | [TIGR03168] hexose kinase, 1-phosphofructokinase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCTGA CGGTGACCCT CAATCCTGCT TTAGACAGGG AAATTTTCAT AGAAGATTTT
CAGGTGAACC GGCTGTACAG AATAAGAGAT CTTTCTAAAA CTCAAATGTC TCCGGGTGGG
AAGGGTATAA ACGTTTCTAT AGCCCTTTCC AGACTGGGGG TGCCGTCAGT CGCCACCGGA
TTCGTGGGTG GGTACATGGG GAAGATTCTT GTGGAGGAAT TGAGAAAAAT TTCAAAGCTG
ATCACGACGA ATTTTGTTTA CGTGGAGGGA GAAACGAGAG AAAACATAGA GATAATCGAC
GAAAAGAATA AAACAATAAC TGCTATAAAT TTTCCCGGTC CAAATGTTAC AGAGATGGAT
GTGGAACACT TTCTGAGAAG ATACAAGATG ACGCTTTCGA AAGTCGATTG CGTTGTCATA
TCGGGGAGTA TTCCACCAGG AGTGAACGAA GAAATATGCA ACGAATTGGT GAGGCTTGCA
CGTGAAAGGG GAATCTTTGT TTTTGTCGAA CAGACTCCCA GATTGCTTGA GAGAATCTAT
GAAGGACCAG AGTATCCTAA CGTTGTGAAA CCGGATTTGA GAGGTAATCA CGCTTCTTTT
CTTGGTGTTG AATTGAAAAC CTTTGATGAT TATGTGAAGC TTGCCGAAAA ACTCGCCGAA
AAATCGCAGA TCTCCGTGGT GTCTTACGAG GTGAAGAACG ATATTGTTGC AACAAGAGAA
GGAGTCTGGC TTATAAAATC CAAAGAAGAA ATAGACACAT CACATCTTCT GGGTGCGGGG
GACGCGTACG TGGCTGGTAT GGTCTATTAC TTCATCAAGC ACGGAGCCAA CTTCCTCGAA
ATGGCAAAGT TTGGTTTTGC CTCCGCACTG GCTGCCACTC GAAGAAAAGA GAAGTACATG
CCCGACCTCG AGGTTATAAA GAAGGAGTAC GATCACTTCA CCGTAGAGAG GGTGAAGTAA
|
|---|
| Protein sequence | MVLTVTLNPA LDREIFIEDF QVNRLYRIRD LSKTQMSPGG KGINVSIALS RLGVPSVATG
FVGGYMGKIL VEELRKISKL ITTNFVYVEG ETRENIEIID EKNKTITAIN FPGPNVTEMD
VEHFLRRYKM TLSKVDCVVI SGSIPPGVNE EICNELVRLA RERGIFVFVE QTPRLLERIY
EGPEYPNVVK PDLRGNHASF LGVELKTFDD YVKLAEKLAE KSQISVVSYE VKNDIVATRE
GVWLIKSKEE IDTSHLLGAG DAYVAGMVYY FIKHGANFLE MAKFGFASAL AATRRKEKYM
PDLEVIKKEY DHFTVERVK
|
|---|
| |